RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CEP250Q9BV73 2442 aa-0.7□□□□□ -2.52
SQLE-202ENST00000518604 ATMQ13315 3056 aa-0.71□□□□□ -2.52
SQLE-202ENST00000518604 MT1GP13640 62 aa-0.71□□□□□ -2.52
SQLE-202ENST00000518604 DMDP11532 3685 aa-0.71□□□□□ -2.52
SQLE-202ENST00000518604 MT1HL1P0DM35 61 aa-0.73□□□□□ -2.53
SQLE-202ENST00000518604 KRTAP20-1Q3LI63 56 aa-0.73□□□□□ -2.53
SQLE-202ENST00000518604 TOMM5Q8N4H5 51 aa-0.73□□□□□ -2.53
SQLE-202ENST00000518604 SAMD9LQ8IVG5 1584 aa-0.74□□□□□ -2.53
SQLE-202ENST00000518604 PCNTO95613 3336 aa-0.77□□□□□ -2.53
SQLE-202ENST00000518604 DEFB4AO15263 64 aa-0.77□□□□□ -2.53
SQLE-202ENST00000518604 WDFY4Q6ZS81 3184 aa-0.77□□□□□ -2.53
SQLE-202ENST00000518604 FREM2Q5SZK8 3169 aa-0.78□□□□□ -2.53
SQLE-202ENST00000518604 MT1MQ8N339 61 aa-0.78□□□□□ -2.53
SQLE-202ENST00000518604 WDFY3Q8IZQ1 3526 aa-0.78□□□□□ -2.53
SQLE-202ENST00000518604 MUC3AQ02505 3323 aa-0.79□□□□□ -2.54
SQLE-202ENST00000518604 MT2AP02795 61 aa-0.79□□□□□ -2.54
SQLE-202ENST00000518604 MT1BP07438 61 aa-0.79□□□□□ -2.54
SQLE-202ENST00000518604 DEFB136Q30KP8 78 aa-0.79□□□□□ -2.54
SQLE-202ENST00000518604 DUOX1Q9NRD9 1551 aa-0.8□□□□□ -2.54
SQLE-202ENST00000518604 SZT2Q5T011 3432 aa-0.8□□□□□ -2.54
SQLE-202ENST00000518604 TOP2AP11388 1531 aaKnown RBP-0.81□□□□□ -2.54
SQLE-202ENST00000518604 RPL39P62891 51 aaKnown RBP-0.82□□□□□ -2.54
SQLE-202ENST00000518604 CEP350Q5VT06 3117 aa-0.82□□□□□ -2.54
SQLE-202ENST00000518604 KRTAP19-6Q3LI70 58 aa-0.84□□□□□ -2.54
SQLE-202ENST00000518604 TOMM7Q9P0U1 55 aa-0.84□□□□□ -2.54
SQLE-202ENST00000518604 DNAH12Q6ZR08 3092 aa-0.85□□□□□ -2.55
SQLE-202ENST00000518604 MROH2BQ7Z745 1585 aa-0.87□□□□□ -2.55
SQLE-202ENST00000518604 RPL39LQ96EH5 51 aaKnown RBP-0.87□□□□□ -2.55
SQLE-202ENST00000518604 BOD1L1Q8NFC6 3051 aa-0.88□□□□□ -2.55
SQLE-202ENST00000518604 XIRP2A4UGR9 3374 aa-0.88□□□□□ -2.55
SQLE-202ENST00000518604 LINC01590Q5TEZ4 76 aa-0.91□□□□□ -2.56
SQLE-202ENST00000518604 MKI67P46013 3256 aaKnown RBP-0.91□□□□□ -2.56
SQLE-202ENST00000518604 SPEGQ15772 3267 aa-0.92□□□□□ -2.56
SQLE-202ENST00000518604 MT1FP04733 61 aa-0.93□□□□□ -2.56
SQLE-202ENST00000518604 CENPEQ02224 2701 aa-0.97□□□□□ -2.57
SQLE-202ENST00000518604 DCHS1Q96JQ0 3298 aa-0.98□□□□□ -2.57
SQLE-202ENST00000518604 RPS29P62273 56 aaKnown RBP-0.98□□□□□ -2.57
SQLE-202ENST00000518604 USP34Q70CQ2 3546 aa-1□□□□□ -2.57
SQLE-202ENST00000518604 RHPN1-AS1Q9BWJ2 59 aa-1□□□□□ -2.57
SQLE-202ENST00000518604 EP400Q96L91 3159 aa-1.01□□□□□ -2.57
SQLE-202ENST00000518604 DEFB104AQ8WTQ1 72 aa-1.01□□□□□ -2.57
SQLE-202ENST00000518604 GCC2Q8IWJ2 1684 aa-1.01□□□□□ -2.57
SQLE-202ENST00000518604 LOC400499M0QZD8 3231 aa-1.03□□□□□ -2.57
SQLE-202ENST00000518604 A0A096LNI7 61 aa-1.04□□□□□ -2.58
SQLE-202ENST00000518604 ASPMQ8IZT6 3477 aa-1.04□□□□□ -2.58
SQLE-202ENST00000518604 DNAH14Q0VDD8 3507 aa-1.05□□□□□ -2.58
SQLE-202ENST00000518604 SNRPGP62308 76 aaKnown RBP-1.05□□□□□ -2.58
SQLE-202ENST00000518604 CFAP47Q6ZTR5 3102 aa-1.07□□□□□ -2.58
SQLE-202ENST00000518604 UNC80Q8N2C7 3258 aa-1.07□□□□□ -2.58
SQLE-202ENST00000518604 DEFB133Q30KQ1 61 aa-1.09□□□□□ -2.58
SQLE-202ENST00000518604 DEFB124Q8NES8 71 aa-1.09□□□□□ -2.58
SQLE-202ENST00000518604 HTN1P15515 57 aa-1.12□□□□□ -2.59
SQLE-202ENST00000518604 BRCA2P51587 3418 aa-1.14□□□□□ -2.59
SQLE-202ENST00000518604 K7EIM0 57 aa-1.17□□□□□ -2.6
SQLE-202ENST00000518604 KRTAP19-2Q3LHN2 52 aa-1.17□□□□□ -2.6
SQLE-202ENST00000518604 VCANP13611 3396 aa-1.18□□□□□ -2.6
SQLE-202ENST00000518604 ARHGAP5-AS1Q96IT6 56 aa-1.18□□□□□ -2.6
SQLE-202ENST00000518604 H3BUX3 64 aa-1.22□□□□□ -2.6
SQLE-202ENST00000518604 PRCDQ00LT1 54 aa-1.22□□□□□ -2.6
SQLE-202ENST00000518604 TTTY10Q9BZA0 68 aa-1.22□□□□□ -2.6
SQLE-202ENST00000518604 CD52P31358 61 aa-1.25□□□□□ -2.61
SQLE-202ENST00000518604 CENPFP49454 3210 aa-1.27□□□□□ -2.61
SQLE-202ENST00000518604 CDH23Q9H251 3354 aa-1.29□□□□□ -2.62
SQLE-202ENST00000518604 VPS13AQ96RL7 3174 aa-1.3□□□□□ -2.62
SQLE-202ENST00000518604 UTRNP46939 3433 aa-1.33□□□□□ -2.62
SQLE-202ENST00000518604 TMEM167AQ8TBQ9 72 aa-1.33□□□□□ -2.62
SQLE-202ENST00000518604 LINC01556Q5JQF7 62 aa-1.35□□□□□ -2.63
SQLE-202ENST00000518604 H3BSH0 61 aa-1.36□□□□□ -2.63
SQLE-202ENST00000518604 RPL39P5Q59GN2 51 aa-1.41□□□□□ -2.64
SQLE-202ENST00000518604 A0A096LPF7 62 aa-1.45□□□□□ -2.64
SQLE-202ENST00000518604 APELAP0DMC3 54 aa-1.47□□□□□ -2.64
SQLE-202ENST00000518604 DEFB108AA8MXU0 73 aa-1.48□□□□□ -2.65
SQLE-202ENST00000518604 GOLGB1Q14789 3259 aaKnown RBP-1.51□□□□□ -2.65
SQLE-202ENST00000518604 HTN3P15516 51 aa-1.67□□□□□ -2.68
SQLE-202ENST00000518604 Q9Y3F1 56 aa-1.73□□□□□ -2.69
SQLE-202ENST00000518604 DEFB108BQ8NET1 73 aa-1.83□□□□□ -2.7
SQLE-202ENST00000518604 COX14Q96I36 57 aa-1.89□□□□□ -2.71
SQLE-202ENST00000518604 STATHP02808 62 aa-2.01□□□□□ -2.73
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms