RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 SMR3BP02814 79 aaPredicted RBP0□□□□□ -2.41
RNF4-219ENST00000513450 MT4P47944 62 aa0□□□□□ -2.41
RNF4-219ENST00000513450 ADGRG4Q8IZF6 3080 aa0□□□□□ -2.41
RNF4-219ENST00000513450 CHD7Q9P2D1 2997 aa-0□□□□□ -2.41
RNF4-219ENST00000513450 DNAH5Q8TE73 4624 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 DNAH17Q9UFH2 4485 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 WDFY3Q8IZQ1 3526 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 TRIOO75962 3097 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 ATMQ13315 3056 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 KRTAP8-1Q8IUC2 63 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 CMYA5Q8N3K9 4069 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 TRRAPQ9Y4A5 3859 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 UTRNP46939 3433 aa-0.01□□□□□ -2.41
RNF4-219ENST00000513450 LOC400499M0QZD8 3231 aa-0.02□□□□□ -2.41
RNF4-219ENST00000513450 MUC17Q685J3 4493 aa-0.02□□□□□ -2.41
RNF4-219ENST00000513450 RPL39P62891 51 aaKnown RBP-0.02□□□□□ -2.41
RNF4-219ENST00000513450 PRUNE2Q8WUY3 3088 aa-0.02□□□□□ -2.41
RNF4-219ENST00000513450 CDH23Q9H251 3354 aa-0.02□□□□□ -2.41
RNF4-219ENST00000513450 DMDP11532 3685 aa-0.02□□□□□ -2.41
RNF4-219ENST00000513450 ASPMQ8IZT6 3477 aa-0.03□□□□□ -2.41
RNF4-219ENST00000513450 XIRP2A4UGR9 3374 aa-0.03□□□□□ -2.41
RNF4-219ENST00000513450 SMG1Q96Q15 3661 aaKnown RBP-0.03□□□□□ -2.41
RNF4-219ENST00000513450 VPS13AQ96RL7 3174 aa-0.03□□□□□ -2.41
RNF4-219ENST00000513450 SNRPGP62308 76 aaKnown RBP-0.04□□□□□ -2.42
RNF4-219ENST00000513450 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
RNF4-219ENST00000513450 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
RNF4-219ENST00000513450 RPL39LQ96EH5 51 aaKnown RBP-0.04□□□□□ -2.42
RNF4-219ENST00000513450 MROH2BQ7Z745 1585 aa-0.04□□□□□ -2.42
RNF4-219ENST00000513450 CENPFP49454 3210 aa-0.04□□□□□ -2.42
RNF4-219ENST00000513450 MUC3AQ02505 3323 aa-0.05□□□□□ -2.42
RNF4-219ENST00000513450 DUOX1Q9NRD9 1551 aa-0.05□□□□□ -2.42
RNF4-219ENST00000513450 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
RNF4-219ENST00000513450 SPART-AS1P0CW21 52 aa-0.06□□□□□ -2.42
RNF4-219ENST00000513450 GOLGB1Q14789 3259 aaKnown RBP-0.07□□□□□ -2.42
RNF4-219ENST00000513450 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
RNF4-219ENST00000513450 TOMM7Q9P0U1 55 aa-0.08□□□□□ -2.42
RNF4-219ENST00000513450 DEFB1P60022 68 aa-0.09□□□□□ -2.42
RNF4-219ENST00000513450 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
RNF4-219ENST00000513450 DEFB104AQ8WTQ1 72 aa-0.1□□□□□ -2.43
RNF4-219ENST00000513450 GCC2Q8IWJ2 1684 aa-0.11□□□□□ -2.43
RNF4-219ENST00000513450 MT1HP80294 61 aa-0.11□□□□□ -2.43
RNF4-219ENST00000513450 MT1EP04732 61 aa-0.14□□□□□ -2.43
RNF4-219ENST00000513450 KRTAP19-2Q3LHN2 52 aa-0.14□□□□□ -2.43
RNF4-219ENST00000513450 MT1BP07438 61 aa-0.15□□□□□ -2.43
RNF4-219ENST00000513450 ARHGAP5-AS1Q96IT6 56 aa-0.15□□□□□ -2.43
RNF4-219ENST00000513450 MT1XP80297 61 aa-0.17□□□□□ -2.44
RNF4-219ENST00000513450 MT1LQ93083 61 aa-0.17□□□□□ -2.44
RNF4-219ENST00000513450 MT1FP04733 61 aa-0.18□□□□□ -2.44
RNF4-219ENST00000513450 MT1HL1P0DM35 61 aa-0.18□□□□□ -2.44
RNF4-219ENST00000513450 LINC01590Q5TEZ4 76 aa-0.18□□□□□ -2.44
RNF4-219ENST00000513450 MT2AP02795 61 aa-0.19□□□□□ -2.44
RNF4-219ENST00000513450 MT1MQ8N339 61 aa-0.2□□□□□ -2.44
RNF4-219ENST00000513450 TTTY10Q9BZA0 68 aa-0.2□□□□□ -2.44
RNF4-219ENST00000513450 MT1GP13640 62 aa-0.21□□□□□ -2.44
RNF4-219ENST00000513450 DEFB136Q30KP8 78 aa-0.21□□□□□ -2.44
RNF4-219ENST00000513450 A0A096LNI7 61 aa-0.22□□□□□ -2.44
RNF4-219ENST00000513450 H3BSH0 61 aa-0.22□□□□□ -2.44
RNF4-219ENST00000513450 DEFB4AO15263 64 aa-0.22□□□□□ -2.44
RNF4-219ENST00000513450 PRCDQ00LT1 54 aa-0.23□□□□□ -2.45
RNF4-219ENST00000513450 K7EIM0 57 aa-0.24□□□□□ -2.45
RNF4-219ENST00000513450 RHPN1-AS1Q9BWJ2 59 aa-0.25□□□□□ -2.45
RNF4-219ENST00000513450 HTN1P15515 57 aa-0.31□□□□□ -2.46
RNF4-219ENST00000513450 DEFB133Q30KQ1 61 aa-0.31□□□□□ -2.46
RNF4-219ENST00000513450 DEFB124Q8NES8 71 aa-0.31□□□□□ -2.46
RNF4-219ENST00000513450 TMEM167AQ8TBQ9 72 aa-0.31□□□□□ -2.46
RNF4-219ENST00000513450 RPL39P5Q59GN2 51 aa-0.33□□□□□ -2.46
RNF4-219ENST00000513450 H3BUX3 64 aa-0.34□□□□□ -2.46
RNF4-219ENST00000513450 RPS29P62273 56 aaKnown RBP-0.34□□□□□ -2.46
RNF4-219ENST00000513450 DEFB108AA8MXU0 73 aa-0.35□□□□□ -2.47
RNF4-219ENST00000513450 APELAP0DMC3 54 aa-0.38□□□□□ -2.47
RNF4-219ENST00000513450 STATHP02808 62 aa-0.39□□□□□ -2.47
RNF4-219ENST00000513450 A0A096LPF7 62 aa-0.42□□□□□ -2.48
RNF4-219ENST00000513450 CD52P31358 61 aa-0.43□□□□□ -2.48
RNF4-219ENST00000513450 LINC01556Q5JQF7 62 aa-0.43□□□□□ -2.48
RNF4-219ENST00000513450 DEFB108BQ8NET1 73 aa-0.48□□□□□ -2.49
RNF4-219ENST00000513450 HTN3P15516 51 aa-0.53□□□□□ -2.49
RNF4-219ENST00000513450 COX14Q96I36 57 aa-0.56□□□□□ -2.5
RNF4-219ENST00000513450 Q9Y3F1 56 aa-0.56□□□□□ -2.5
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms