RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 LINC00308Q8TCZ7 52 aa-1.38□□□□□ -2.63
SMN1-208ENST00000513228 TMEM167BQ9NRX6 74 aa-1.39□□□□□ -2.63
SMN1-208ENST00000513228 LMO7Q8WWI1 1683 aa-1.39□□□□□ -2.63
SMN1-208ENST00000513228 SMIM27A0A1W2PRY6 76 aa-1.42□□□□□ -2.64
SMN1-208ENST00000513228 IGIPA6NJ69 53 aa-1.42□□□□□ -2.64
SMN1-208ENST00000513228 CCDC180Q9P1Z9 1646 aa-1.42□□□□□ -2.64
SMN1-208ENST00000513228 EFCAB6Q5THR3 1501 aa-1.43□□□□□ -2.64
SMN1-208ENST00000513228 WFDC10BQ8IUB3 73 aa-1.43□□□□□ -2.64
SMN1-208ENST00000513228 EFCAB5A4FU69 1503 aa-1.44□□□□□ -2.64
SMN1-208ENST00000513228 SERF2P84101 59 aa-1.44□□□□□ -2.64
SMN1-208ENST00000513228 NMES1Q9C002 83 aa-1.44□□□□□ -2.64
SMN1-208ENST00000513228 POLR2KP53803 58 aaKnown RBP-1.45□□□□□ -2.64
SMN1-208ENST00000513228 SCRIBQ14160 1630 aa-1.45□□□□□ -2.64
SMN1-208ENST00000513228 DEFB133Q30KQ1 61 aa-1.47□□□□□ -2.64
SMN1-208ENST00000513228 DEFB104AQ8WTQ1 72 aa-1.48□□□□□ -2.65
SMN1-208ENST00000513228 MROH2AA6NES4 1674 aa-1.48□□□□□ -2.65
SMN1-208ENST00000513228 CD52P31358 61 aa-1.49□□□□□ -2.65
SMN1-208ENST00000513228 UGGT1Q9NYU2 1555 aa-1.5□□□□□ -2.65
SMN1-208ENST00000513228 H0YGX0 51 aa-1.53□□□□□ -2.65
SMN1-208ENST00000513228 ABCA10Q8WWZ4 1543 aa-1.54□□□□□ -2.66
SMN1-208ENST00000513228 A0A087WWC5 75 aa-1.54□□□□□ -2.66
SMN1-208ENST00000513228 NFAT5O94916 1531 aa-1.55□□□□□ -2.66
SMN1-208ENST00000513228 CPS1P31327 1500 aa-1.55□□□□□ -2.66
SMN1-208ENST00000513228 SYCP2Q9BX26 1530 aa-1.55□□□□□ -2.66
SMN1-208ENST00000513228 HTN1P15515 57 aa-1.55□□□□□ -2.66
SMN1-208ENST00000513228 RHPN1-AS1Q9BWJ2 59 aa-1.55□□□□□ -2.66
SMN1-208ENST00000513228 DEFB131AP59861 70 aa-1.56□□□□□ -2.66
SMN1-208ENST00000513228 AGLP35573 1532 aa-1.56□□□□□ -2.66
SMN1-208ENST00000513228 DDX60Q8IY21 1712 aaKnown RBP-1.57□□□□□ -2.66
SMN1-208ENST00000513228 A0A096LNI7 61 aa-1.58□□□□□ -2.66
SMN1-208ENST00000513228 TFF3Q07654 80 aa-1.59□□□□□ -2.66
SMN1-208ENST00000513228 DEFB124Q8NES8 71 aa-1.59□□□□□ -2.66
SMN1-208ENST00000513228 S100ZQ8WXG8 99 aa-1.59□□□□□ -2.66
SMN1-208ENST00000513228 LINC01556Q5JQF7 62 aa-1.62□□□□□ -2.67
SMN1-208ENST00000513228 LINC01590Q5TEZ4 76 aa-1.63□□□□□ -2.67
SMN1-208ENST00000513228 SMIM2Q9BVW6 85 aa-1.63□□□□□ -2.67
SMN1-208ENST00000513228 ADCY10Q96PN6 1610 aa-1.63□□□□□ -2.67
SMN1-208ENST00000513228 PRXQ9BXM0 1461 aa-1.63□□□□□ -2.67
SMN1-208ENST00000513228 CLTCL1P53675 1640 aa-1.65□□□□□ -2.67
SMN1-208ENST00000513228 ABCA5Q8WWZ7 1642 aa-1.65□□□□□ -2.67
SMN1-208ENST00000513228 PLNP26678 52 aa-1.65□□□□□ -2.67
SMN1-208ENST00000513228 SMIM5Q71RC9 77 aa-1.67□□□□□ -2.68
SMN1-208ENST00000513228 TRPM2O94759 1503 aa-1.67□□□□□ -2.68
SMN1-208ENST00000513228 IQGAP1P46940 1657 aa-1.67□□□□□ -2.68
SMN1-208ENST00000513228 TOMM7Q9P0U1 55 aa-1.7□□□□□ -2.68
SMN1-208ENST00000513228 DUOX1Q9NRD9 1551 aa-1.72□□□□□ -2.68
SMN1-208ENST00000513228 TOP2AP11388 1531 aaKnown RBP-1.75□□□□□ -2.69
SMN1-208ENST00000513228 ABCC8Q09428 1581 aa-1.75□□□□□ -2.69
SMN1-208ENST00000513228 NDUFA1O15239 70 aa-1.76□□□□□ -2.69
SMN1-208ENST00000513228 FANCD2Q9BXW9 1451 aa-1.77□□□□□ -2.69
SMN1-208ENST00000513228 ATP7AQ04656 1500 aa-1.78□□□□□ -2.69
SMN1-208ENST00000513228 A0A096LPF7 62 aa-1.79□□□□□ -2.7
SMN1-208ENST00000513228 H3BUX3 64 aa-1.79□□□□□ -2.7
SMN1-208ENST00000513228 APELAP0DMC3 54 aa-1.79□□□□□ -2.7
SMN1-208ENST00000513228 CMC2Q9NRP2 79 aa-1.79□□□□□ -2.7
SMN1-208ENST00000513228 ERICH3Q5RHP9 1530 aa-1.8□□□□□ -2.7
SMN1-208ENST00000513228 SMIM31A0A1B0GVY4 71 aa-1.83□□□□□ -2.7
SMN1-208ENST00000513228 HTN3P15516 51 aa-1.83□□□□□ -2.7
SMN1-208ENST00000513228 SAMD9LQ8IVG5 1584 aa-1.85□□□□□ -2.7
SMN1-208ENST00000513228 MROH2BQ7Z745 1585 aa-1.85□□□□□ -2.71
SMN1-208ENST00000513228 RPL39P62891 51 aaKnown RBP-1.86□□□□□ -2.71
SMN1-208ENST00000513228 H3BSH0 61 aa-1.9□□□□□ -2.71
SMN1-208ENST00000513228 RPL39LQ96EH5 51 aaKnown RBP-1.9□□□□□ -2.71
SMN1-208ENST00000513228 K7EIM0 57 aa-1.95□□□□□ -2.72
SMN1-208ENST00000513228 PRCDQ00LT1 54 aa-1.95□□□□□ -2.72
SMN1-208ENST00000513228 IQGAP2Q13576 1575 aa-1.96□□□□□ -2.72
SMN1-208ENST00000513228 TMEM167AQ8TBQ9 72 aa-1.96□□□□□ -2.72
SMN1-208ENST00000513228 Q9Y3F1 56 aa-1.96□□□□□ -2.72
SMN1-208ENST00000513228 COX14Q96I36 57 aa-2.01□□□□□ -2.73
SMN1-208ENST00000513228 ARHGAP5-AS1Q96IT6 56 aa-2.03□□□□□ -2.73
SMN1-208ENST00000513228 DEFB108BQ8NET1 73 aa-2.04□□□□□ -2.74
SMN1-208ENST00000513228 SNRPGP15A8MWD9 76 aa-2.07□□□□□ -2.74
SMN1-208ENST00000513228 STATHP02808 62 aa-2.08□□□□□ -2.74
SMN1-208ENST00000513228 DEFB108AA8MXU0 73 aa-2.13□□□□□ -2.75
SMN1-208ENST00000513228 RPL39P5Q59GN2 51 aa-2.13□□□□□ -2.75
SMN1-208ENST00000513228 GCC2Q8IWJ2 1684 aa-2.13□□□□□ -2.75
SMN1-208ENST00000513228 SNRPGP62308 76 aaKnown RBP-2.18□□□□□ -2.76
SMN1-208ENST00000513228 TOMM5Q8N4H5 51 aa-2.26□□□□□ -2.77
Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms