RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 INE1O15225 51 aa3.19□□□□□ -1.9
NR1I3-231ENST00000512340 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
NR1I3-231ENST00000512340 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
NR1I3-231ENST00000512340 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
NR1I3-231ENST00000512340 A0A0D9SG42 100 aa3.11□□□□□ -1.91
NR1I3-231ENST00000512340 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
NR1I3-231ENST00000512340 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
NR1I3-231ENST00000512340 KMT2DO14686 5537 aa3.1□□□□□ -1.91
NR1I3-231ENST00000512340 MT1XP80297 61 aa3.09□□□□□ -1.91
NR1I3-231ENST00000512340 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
NR1I3-231ENST00000512340 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
NR1I3-231ENST00000512340 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
NR1I3-231ENST00000512340 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
NR1I3-231ENST00000512340 KRTAP12-1P59990 96 aa3□□□□□ -1.93
NR1I3-231ENST00000512340 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
NR1I3-231ENST00000512340 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
NR1I3-231ENST00000512340 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
NR1I3-231ENST00000512340 SPRR2EP22531 72 aa2.96□□□□□ -1.94
NR1I3-231ENST00000512340 SPRR2BP35325 72 aa2.96□□□□□ -1.94
NR1I3-231ENST00000512340 SPRR2AP35326 72 aa2.96□□□□□ -1.94
NR1I3-231ENST00000512340 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
NR1I3-231ENST00000512340 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
NR1I3-231ENST00000512340 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
NR1I3-231ENST00000512340 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
NR1I3-231ENST00000512340 TNP1P09430 55 aa2.93□□□□□ -1.94
NR1I3-231ENST00000512340 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
NR1I3-231ENST00000512340 SPRR2DP22532 72 aa2.88□□□□□ -1.95
NR1I3-231ENST00000512340 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
NR1I3-231ENST00000512340 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
NR1I3-231ENST00000512340 MT1EP04732 61 aa2.75□□□□□ -1.97
NR1I3-231ENST00000512340 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
NR1I3-231ENST00000512340 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
NR1I3-231ENST00000512340 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
NR1I3-231ENST00000512340 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
NR1I3-231ENST00000512340 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
NR1I3-231ENST00000512340 MT1GP13640 62 aa2.71□□□□□ -1.98
NR1I3-231ENST00000512340 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
NR1I3-231ENST00000512340 MT1LQ93083 61 aa2.65□□□□□ -1.99
NR1I3-231ENST00000512340 MT1MQ8N339 61 aa2.61□□□□□ -1.99
NR1I3-231ENST00000512340 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
NR1I3-231ENST00000512340 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
NR1I3-231ENST00000512340 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
NR1I3-231ENST00000512340 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
NR1I3-231ENST00000512340 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
NR1I3-231ENST00000512340 MT4P47944 62 aa2.49□□□□□ -2.01
NR1I3-231ENST00000512340 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
NR1I3-231ENST00000512340 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
NR1I3-231ENST00000512340 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
NR1I3-231ENST00000512340 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
NR1I3-231ENST00000512340 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
NR1I3-231ENST00000512340 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
NR1I3-231ENST00000512340 MT1AP04731 61 aa2.28□□□□□ -2.04
NR1I3-231ENST00000512340 MT3P25713 68 aa2.28□□□□□ -2.04
NR1I3-231ENST00000512340 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
NR1I3-231ENST00000512340 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
NR1I3-231ENST00000512340 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
NR1I3-231ENST00000512340 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
NR1I3-231ENST00000512340 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
NR1I3-231ENST00000512340 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
NR1I3-231ENST00000512340 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
NR1I3-231ENST00000512340 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
NR1I3-231ENST00000512340 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
NR1I3-231ENST00000512340 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
NR1I3-231ENST00000512340 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
NR1I3-231ENST00000512340 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
NR1I3-231ENST00000512340 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
NR1I3-231ENST00000512340 LCE1EQ5T753 118 aa2.01□□□□□ -2.09
NR1I3-231ENST00000512340 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
NR1I3-231ENST00000512340 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
NR1I3-231ENST00000512340 PRM1P04553 51 aa1.83□□□□□ -2.12
NR1I3-231ENST00000512340 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
NR1I3-231ENST00000512340 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
NR1I3-231ENST00000512340 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
NR1I3-231ENST00000512340 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
NR1I3-231ENST00000512340 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
NR1I3-231ENST00000512340 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
NR1I3-231ENST00000512340 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
NR1I3-231ENST00000512340 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 114.5 ms