RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 COX6B2Q6YFQ2 88 aa2.96□□□□□ -1.94
VEGFC-201ENST00000507638 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
VEGFC-201ENST00000507638 TYMSOSQ8TAI1 123 aa2.95□□□□□ -1.94
VEGFC-201ENST00000507638 H0YAA0 97 aa2.94□□□□□ -1.94
VEGFC-201ENST00000507638 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
VEGFC-201ENST00000507638 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
VEGFC-201ENST00000507638 RPL37P61927 97 aaKnown RBP2.91□□□□□ -1.94
VEGFC-201ENST00000507638 C20orf166-AS1Q96NR2 134 aa2.91□□□□□ -1.94
VEGFC-201ENST00000507638 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
VEGFC-201ENST00000507638 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
VEGFC-201ENST00000507638 CRIPTQ9P021 101 aa2.87□□□□□ -1.95
VEGFC-201ENST00000507638 MT2AP02795 61 aa2.85□□□□□ -1.95
VEGFC-201ENST00000507638 MT1FP04733 61 aa2.83□□□□□ -1.96
VEGFC-201ENST00000507638 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
VEGFC-201ENST00000507638 P0C880 135 aa2.8□□□□□ -1.96
VEGFC-201ENST00000507638 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 SPRR2EP22531 72 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 SPRR2BP35325 72 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 SPRR2AP35326 72 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 S4R3F8 94 aa2.78□□□□□ -1.96
VEGFC-201ENST00000507638 M0QZ58 72 aa2.76□□□□□ -1.97
VEGFC-201ENST00000507638 A0A0D9SG42 100 aa2.74□□□□□ -1.97
VEGFC-201ENST00000507638 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
VEGFC-201ENST00000507638 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
VEGFC-201ENST00000507638 SPRR2DP22532 72 aa2.69□□□□□ -1.98
VEGFC-201ENST00000507638 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
VEGFC-201ENST00000507638 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
VEGFC-201ENST00000507638 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
VEGFC-201ENST00000507638 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
VEGFC-201ENST00000507638 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
VEGFC-201ENST00000507638 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
VEGFC-201ENST00000507638 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
VEGFC-201ENST00000507638 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
VEGFC-201ENST00000507638 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
VEGFC-201ENST00000507638 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
VEGFC-201ENST00000507638 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
VEGFC-201ENST00000507638 R4GN34 69 aa2.59□□□□□ -1.99
VEGFC-201ENST00000507638 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
VEGFC-201ENST00000507638 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
VEGFC-201ENST00000507638 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
VEGFC-201ENST00000507638 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
VEGFC-201ENST00000507638 TNP1P09430 55 aa2.45□□□□□ -2.02
VEGFC-201ENST00000507638 MT4P47944 62 aa2.43□□□□□ -2.02
VEGFC-201ENST00000507638 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
VEGFC-201ENST00000507638 MT1BP07438 61 aa2.42□□□□□ -2.02
VEGFC-201ENST00000507638 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
VEGFC-201ENST00000507638 INE1O15225 51 aa2.38□□□□□ -2.03
VEGFC-201ENST00000507638 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
VEGFC-201ENST00000507638 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
VEGFC-201ENST00000507638 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
VEGFC-201ENST00000507638 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
VEGFC-201ENST00000507638 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
VEGFC-201ENST00000507638 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
VEGFC-201ENST00000507638 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
VEGFC-201ENST00000507638 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
VEGFC-201ENST00000507638 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
VEGFC-201ENST00000507638 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
VEGFC-201ENST00000507638 MT1XP80297 61 aa2.1□□□□□ -2.07
VEGFC-201ENST00000507638 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
VEGFC-201ENST00000507638 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
VEGFC-201ENST00000507638 MT1GP13640 62 aa1.91□□□□□ -2.1
VEGFC-201ENST00000507638 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
VEGFC-201ENST00000507638 MT1EP04732 61 aa1.9□□□□□ -2.11
VEGFC-201ENST00000507638 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
VEGFC-201ENST00000507638 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
VEGFC-201ENST00000507638 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
VEGFC-201ENST00000507638 MT1MQ8N339 61 aa1.86□□□□□ -2.11
VEGFC-201ENST00000507638 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
VEGFC-201ENST00000507638 MT1LQ93083 61 aa1.78□□□□□ -2.12
VEGFC-201ENST00000507638 MT1AP04731 61 aa1.68□□□□□ -2.14
VEGFC-201ENST00000507638 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
VEGFC-201ENST00000507638 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
VEGFC-201ENST00000507638 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
VEGFC-201ENST00000507638 PRM1P04553 51 aa1.51□□□□□ -2.17
VEGFC-201ENST00000507638 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
VEGFC-201ENST00000507638 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
VEGFC-201ENST00000507638 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms