RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 KRTAP19-5Q3LI72 72 aa0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 NOP10Q9NPE3 64 aaKnown RBP0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
CDC42SE2-210ENST00000506929 DCHS1Q96JQ0 3298 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 LAMA2P24043 3122 aaKnown RBP0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 HTTP42858 3142 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 MTORP42345 2549 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 H0YGG7 62 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 H3BUA1 57 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 TNP1P09430 55 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 RHPN1-AS1Q9BWJ2 59 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 U3KQA8 63 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 MGAM2Q2M2H8 2515 aa0.05□□□□□ -2.4
CDC42SE2-210ENST00000506929 FLNBO75369 2602 aaKnown RBP0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPRR2DP22532 72 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 KRTAP20-2Q3LI61 65 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 LINC01556Q5JQF7 62 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 KRTAP8-1Q8IUC2 63 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPEGQ15772 3267 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 ITPR2Q14571 2701 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 SZT2Q5T011 3432 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 EYSQ5T1H1 3165 aa0.04□□□□□ -2.4
CDC42SE2-210ENST00000506929 FAM186AA6NE01 2351 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 VPS13AQ96RL7 3174 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 KRTAP19-8Q3LI54 63 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 SPRR2FQ96RM1 72 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 ASPMQ8IZT6 3477 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 NBEAL1Q6ZS30 2694 aa0.03□□□□□ -2.4
CDC42SE2-210ENST00000506929 NIPBLQ6KC79 2804 aaeCLIP0.03□□□□□ -2.41
CDC42SE2-210ENST00000506929 TLN2Q9Y4G6 2542 aa0.03□□□□□ -2.41
CDC42SE2-210ENST00000506929 FREM2Q5SZK8 3169 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 EP400Q96L91 3159 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 CENPFP49454 3210 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 CEP250Q9BV73 2442 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1AP04731 61 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 SPRR2EP22531 72 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1XP80297 61 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 DEFB133Q30KQ1 61 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1LQ93083 61 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MUC3AQ02505 3323 aa0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 UTRNP46939 3433 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 USP34Q70CQ2 3546 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 WDFY3Q8IZQ1 3526 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 LOC400499M0QZD8 3231 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 VCANP13611 3396 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 H3BUX3 64 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1BP07438 61 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 SPRR2BP35325 72 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 COX14Q96I36 57 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 PCNTO95613 3336 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 BRCA2P51587 3418 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 DNAH14Q0VDD8 3507 aa0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 TLN1Q9Y490 2541 aaKnown RBP0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 MYO9AB2RTY4 2548 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1EP04732 61 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 SPRR2AP35326 72 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 CENPEQ02224 2701 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 KRTAP19-2Q3LHN2 52 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1MQ8N339 61 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 DEFB124Q8NES8 71 aa0□□□□□ -2.41
CDC42SE2-210ENST00000506929 XIRP2A4UGR9 3374 aa-0□□□□□ -2.41
CDC42SE2-210ENST00000506929 CEP295Q9C0D2 2601 aa-0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1FP04733 61 aa-0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 CD52P31358 61 aa-0.01□□□□□ -2.41
CDC42SE2-210ENST00000506929 GOLGB1Q14789 3259 aaKnown RBP-0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT2AP02795 61 aa-0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT4P47944 62 aa-0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 MT1HP80294 61 aa-0.02□□□□□ -2.41
CDC42SE2-210ENST00000506929 CDH23Q9H251 3354 aa-0.04□□□□□ -2.42
CDC42SE2-210ENST00000506929 RPS29P62273 56 aaKnown RBP-0.06□□□□□ -2.42
CDC42SE2-210ENST00000506929 MT1HL1P0DM35 61 aa-0.07□□□□□ -2.42
CDC42SE2-210ENST00000506929 KRTAP19-6Q3LI70 58 aa-0.07□□□□□ -2.42
CDC42SE2-210ENST00000506929 Q9Y3F1 56 aa-0.12□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 69.8 ms