RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
GPATCH4-211ENST00000506832 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
GPATCH4-211ENST00000506832 A0A0D9SG42 100 aa5.05□□□□□ -1.6
GPATCH4-211ENST00000506832 A8MU10 97 aa5.03□□□□□ -1.6
GPATCH4-211ENST00000506832 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
GPATCH4-211ENST00000506832 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
GPATCH4-211ENST00000506832 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
GPATCH4-211ENST00000506832 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
GPATCH4-211ENST00000506832 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
GPATCH4-211ENST00000506832 K7ERS5 55 aa4.94□□□□□ -1.62
GPATCH4-211ENST00000506832 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
GPATCH4-211ENST00000506832 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
GPATCH4-211ENST00000506832 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
GPATCH4-211ENST00000506832 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
GPATCH4-211ENST00000506832 MT1EP04732 61 aa4.78□□□□□ -1.64
GPATCH4-211ENST00000506832 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
GPATCH4-211ENST00000506832 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
GPATCH4-211ENST00000506832 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
GPATCH4-211ENST00000506832 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
GPATCH4-211ENST00000506832 ROMO1P60602 79 aa4.67□□□□□ -1.66
GPATCH4-211ENST00000506832 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
GPATCH4-211ENST00000506832 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
GPATCH4-211ENST00000506832 MT1GP13640 62 aa4.58□□□□□ -1.68
GPATCH4-211ENST00000506832 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
GPATCH4-211ENST00000506832 MT1MQ8N339 61 aa4.57□□□□□ -1.68
GPATCH4-211ENST00000506832 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
GPATCH4-211ENST00000506832 TNP1P09430 55 aa4.56□□□□□ -1.68
GPATCH4-211ENST00000506832 MT4P47944 62 aa4.56□□□□□ -1.68
GPATCH4-211ENST00000506832 MT1LQ93083 61 aa4.56□□□□□ -1.68
GPATCH4-211ENST00000506832 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
GPATCH4-211ENST00000506832 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
GPATCH4-211ENST00000506832 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
GPATCH4-211ENST00000506832 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
GPATCH4-211ENST00000506832 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
GPATCH4-211ENST00000506832 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
GPATCH4-211ENST00000506832 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
GPATCH4-211ENST00000506832 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
GPATCH4-211ENST00000506832 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
GPATCH4-211ENST00000506832 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
GPATCH4-211ENST00000506832 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
GPATCH4-211ENST00000506832 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
GPATCH4-211ENST00000506832 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
GPATCH4-211ENST00000506832 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
GPATCH4-211ENST00000506832 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
GPATCH4-211ENST00000506832 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
GPATCH4-211ENST00000506832 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
GPATCH4-211ENST00000506832 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
GPATCH4-211ENST00000506832 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
GPATCH4-211ENST00000506832 MT1AP04731 61 aa3.87□□□□□ -1.79
GPATCH4-211ENST00000506832 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
GPATCH4-211ENST00000506832 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
GPATCH4-211ENST00000506832 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
GPATCH4-211ENST00000506832 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
GPATCH4-211ENST00000506832 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
GPATCH4-211ENST00000506832 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
GPATCH4-211ENST00000506832 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
GPATCH4-211ENST00000506832 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
GPATCH4-211ENST00000506832 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
GPATCH4-211ENST00000506832 MT3P25713 68 aa3.53□□□□□ -1.84
GPATCH4-211ENST00000506832 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
GPATCH4-211ENST00000506832 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
GPATCH4-211ENST00000506832 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
GPATCH4-211ENST00000506832 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
GPATCH4-211ENST00000506832 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
GPATCH4-211ENST00000506832 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
GPATCH4-211ENST00000506832 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
GPATCH4-211ENST00000506832 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
GPATCH4-211ENST00000506832 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
GPATCH4-211ENST00000506832 INE1O15225 51 aa2.93□□□□□ -1.94
GPATCH4-211ENST00000506832 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
GPATCH4-211ENST00000506832 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
GPATCH4-211ENST00000506832 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
GPATCH4-211ENST00000506832 PHGR1C9JFL3 82 aa2.53□□□□□ -2
GPATCH4-211ENST00000506832 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
GPATCH4-211ENST00000506832 PRM1P04553 51 aa2.43□□□□□ -2.02
GPATCH4-211ENST00000506832 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
GPATCH4-211ENST00000506832 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
GPATCH4-211ENST00000506832 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms