RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
HTT-203ENST00000506137 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
HTT-203ENST00000506137 MT1HP80294 61 aa3.57□□□□□ -1.84
HTT-203ENST00000506137 A0A096LNI7 61 aa3.56□□□□□ -1.84
HTT-203ENST00000506137 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
HTT-203ENST00000506137 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
HTT-203ENST00000506137 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
HTT-203ENST00000506137 M0R2T5 61 aa3.45□□□□□ -1.86
HTT-203ENST00000506137 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
HTT-203ENST00000506137 SPINK6Q6UWN8 80 aa3.44□□□□□ -1.86
HTT-203ENST00000506137 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
HTT-203ENST00000506137 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
HTT-203ENST00000506137 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
HTT-203ENST00000506137 TNP1P09430 55 aa3.36□□□□□ -1.87
HTT-203ENST00000506137 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
HTT-203ENST00000506137 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
HTT-203ENST00000506137 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.88
HTT-203ENST00000506137 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
HTT-203ENST00000506137 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
HTT-203ENST00000506137 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
HTT-203ENST00000506137 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
HTT-203ENST00000506137 C9orf92A6NGG3 77 aa3.25□□□□□ -1.89
HTT-203ENST00000506137 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HTT-203ENST00000506137 SPRR2EP22531 72 aa3.22□□□□□ -1.89
HTT-203ENST00000506137 SPRR2BP35325 72 aa3.22□□□□□ -1.89
HTT-203ENST00000506137 SPRR2AP35326 72 aa3.22□□□□□ -1.89
HTT-203ENST00000506137 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
HTT-203ENST00000506137 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
HTT-203ENST00000506137 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
HTT-203ENST00000506137 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
HTT-203ENST00000506137 SPRR2DP22532 72 aa3.13□□□□□ -1.91
HTT-203ENST00000506137 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
HTT-203ENST00000506137 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
HTT-203ENST00000506137 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
HTT-203ENST00000506137 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
HTT-203ENST00000506137 MT2AP02795 61 aa3.04□□□□□ -1.92
HTT-203ENST00000506137 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
HTT-203ENST00000506137 MT1FP04733 61 aa3.01□□□□□ -1.93
HTT-203ENST00000506137 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
HTT-203ENST00000506137 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
HTT-203ENST00000506137 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
HTT-203ENST00000506137 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
HTT-203ENST00000506137 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
HTT-203ENST00000506137 MT4P47944 62 aa2.8□□□□□ -1.96
HTT-203ENST00000506137 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
HTT-203ENST00000506137 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HTT-203ENST00000506137 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
HTT-203ENST00000506137 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
HTT-203ENST00000506137 PRM1P04553 51 aa2.52□□□□□ -2.01
HTT-203ENST00000506137 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
HTT-203ENST00000506137 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
HTT-203ENST00000506137 MT1BP07438 61 aa2.48□□□□□ -2.01
HTT-203ENST00000506137 SPRR2GQ9BYE4 73 aa2.46□□□□□ -2.02
HTT-203ENST00000506137 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
HTT-203ENST00000506137 MT1AP04731 61 aa2.38□□□□□ -2.03
HTT-203ENST00000506137 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
HTT-203ENST00000506137 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
HTT-203ENST00000506137 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
HTT-203ENST00000506137 MT1XP80297 61 aa2.33□□□□□ -2.04
HTT-203ENST00000506137 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
HTT-203ENST00000506137 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
HTT-203ENST00000506137 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
HTT-203ENST00000506137 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
HTT-203ENST00000506137 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
HTT-203ENST00000506137 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
HTT-203ENST00000506137 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
HTT-203ENST00000506137 KRTAP19-7Q3SYF9 63 aa2.08□□□□□ -2.08
HTT-203ENST00000506137 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
HTT-203ENST00000506137 MT1EP04732 61 aa2.04□□□□□ -2.08
HTT-203ENST00000506137 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
HTT-203ENST00000506137 MT1LQ93083 61 aa1.99□□□□□ -2.09
HTT-203ENST00000506137 MT1GP13640 62 aa1.97□□□□□ -2.09
HTT-203ENST00000506137 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
HTT-203ENST00000506137 MT1MQ8N339 61 aa1.93□□□□□ -2.1
HTT-203ENST00000506137 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
HTT-203ENST00000506137 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
HTT-203ENST00000506137 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
HTT-203ENST00000506137 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 53.5 ms