RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 ADM2Q7Z4H4 148 aa2.08□□□□□ -2.08
CPNE4-204ENST00000505331 A0A1B0GU33 70 aa2.07□□□□□ -2.08
CPNE4-204ENST00000505331 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
CPNE4-204ENST00000505331 ROMO1P60602 79 aa2.06□□□□□ -2.08
CPNE4-204ENST00000505331 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
CPNE4-204ENST00000505331 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
CPNE4-204ENST00000505331 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
CPNE4-204ENST00000505331 H0YAA0 97 aa2.05□□□□□ -2.08
CPNE4-204ENST00000505331 H1FX-AS1Q4G0G2 97 aa2.05□□□□□ -2.08
CPNE4-204ENST00000505331 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
CPNE4-204ENST00000505331 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
CPNE4-204ENST00000505331 MT1BP07438 61 aa1.95□□□□□ -2.1
CPNE4-204ENST00000505331 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
CPNE4-204ENST00000505331 CRIPTQ9P021 101 aa1.95□□□□□ -2.1
CPNE4-204ENST00000505331 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
CPNE4-204ENST00000505331 M0QZ58 72 aa1.92□□□□□ -2.1
CPNE4-204ENST00000505331 P0C880 135 aa1.92□□□□□ -2.1
CPNE4-204ENST00000505331 S4R3F8 94 aa1.92□□□□□ -2.1
CPNE4-204ENST00000505331 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CPNE4-204ENST00000505331 MT4P47944 62 aa1.88□□□□□ -2.11
CPNE4-204ENST00000505331 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
CPNE4-204ENST00000505331 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CPNE4-204ENST00000505331 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CPNE4-204ENST00000505331 A0A0D9SG42 100 aa1.86□□□□□ -2.11
CPNE4-204ENST00000505331 KRTAP12-1P59990 96 aa1.86□□□□□ -2.11
CPNE4-204ENST00000505331 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
CPNE4-204ENST00000505331 NDUFAF8A1L188 74 aa1.85□□□□□ -2.11
CPNE4-204ENST00000505331 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
CPNE4-204ENST00000505331 KRTAP12-2P59991 146 aa1.83□□□□□ -2.12
CPNE4-204ENST00000505331 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CPNE4-204ENST00000505331 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
CPNE4-204ENST00000505331 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
CPNE4-204ENST00000505331 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
CPNE4-204ENST00000505331 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
CPNE4-204ENST00000505331 PLAC4Q8WY50 150 aa1.79□□□□□ -2.12
CPNE4-204ENST00000505331 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
CPNE4-204ENST00000505331 A0A0A0MQY5 61 aa1.78□□□□□ -2.12
CPNE4-204ENST00000505331 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
CPNE4-204ENST00000505331 R4GN34 69 aa1.78□□□□□ -2.12
CPNE4-204ENST00000505331 MT3P25713 68 aa1.72□□□□□ -2.13
CPNE4-204ENST00000505331 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
CPNE4-204ENST00000505331 MT1XP80297 61 aa1.71□□□□□ -2.14
CPNE4-204ENST00000505331 TNP1P09430 55 aa1.7□□□□□ -2.14
CPNE4-204ENST00000505331 CAMK2N1Q7Z7J9 78 aa1.7□□□□□ -2.14
CPNE4-204ENST00000505331 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CPNE4-204ENST00000505331 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
CPNE4-204ENST00000505331 INE1O15225 51 aa1.64□□□□□ -2.15
CPNE4-204ENST00000505331 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
CPNE4-204ENST00000505331 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
CPNE4-204ENST00000505331 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
CPNE4-204ENST00000505331 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
CPNE4-204ENST00000505331 MT1GP13640 62 aa1.56□□□□□ -2.16
CPNE4-204ENST00000505331 MT1EP04732 61 aa1.55□□□□□ -2.16
CPNE4-204ENST00000505331 LCE1FQ5T754 118 aa1.55□□□□□ -2.16
CPNE4-204ENST00000505331 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
CPNE4-204ENST00000505331 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
CPNE4-204ENST00000505331 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
CPNE4-204ENST00000505331 MT1MQ8N339 61 aa1.51□□□□□ -2.17
CPNE4-204ENST00000505331 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
CPNE4-204ENST00000505331 LCE3AQ5TA76 89 aa1.49□□□□□ -2.17
CPNE4-204ENST00000505331 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
CPNE4-204ENST00000505331 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
CPNE4-204ENST00000505331 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
CPNE4-204ENST00000505331 MT1LQ93083 61 aa1.41□□□□□ -2.18
CPNE4-204ENST00000505331 KRTAP19-5Q3LI72 72 aa1.37□□□□□ -2.19
CPNE4-204ENST00000505331 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
CPNE4-204ENST00000505331 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
CPNE4-204ENST00000505331 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
CPNE4-204ENST00000505331 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
CPNE4-204ENST00000505331 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
CPNE4-204ENST00000505331 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
CPNE4-204ENST00000505331 MT1AP04731 61 aa1.19□□□□□ -2.22
CPNE4-204ENST00000505331 LCE3DQ9BYE3 92 aa1.09□□□□□ -2.23
CPNE4-204ENST00000505331 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.24
CPNE4-204ENST00000505331 PRM1P04553 51 aa1.03□□□□□ -2.24
CPNE4-204ENST00000505331 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CPNE4-204ENST00000505331 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
CPNE4-204ENST00000505331 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms