RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 WFDC13Q8IUB5 93 aa0.98□□□□□ -2.25
EXOSC3-208ENST00000496910 KAAG1Q9UBP8 84 aa0.97□□□□□ -2.25
EXOSC3-208ENST00000496910 CMC2Q9NRP2 79 aa0.96□□□□□ -2.26
EXOSC3-208ENST00000496910 PRH1P02810 166 aa0.95□□□□□ -2.26
EXOSC3-208ENST00000496910 PLNP26678 52 aa0.94□□□□□ -2.26
EXOSC3-208ENST00000496910 MINOS1Q5TGZ0 78 aa0.94□□□□□ -2.26
EXOSC3-208ENST00000496910 MT1BP07438 61 aa0.91□□□□□ -2.26
EXOSC3-208ENST00000496910 SMIM27A0A1W2PRY6 76 aa0.9□□□□□ -2.27
EXOSC3-208ENST00000496910 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
EXOSC3-208ENST00000496910 TOMM5Q8N4H5 51 aa0.9□□□□□ -2.27
EXOSC3-208ENST00000496910 H0YGX0 51 aa0.89□□□□□ -2.27
EXOSC3-208ENST00000496910 DEFB130BP0DP73 79 aa0.89□□□□□ -2.27
EXOSC3-208ENST00000496910 DEFB130AP0DP74 79 aa0.89□□□□□ -2.27
EXOSC3-208ENST00000496910 IAPPP10997 89 aa0.89□□□□□ -2.27
EXOSC3-208ENST00000496910 SPINK4O60575 86 aa0.88□□□□□ -2.27
EXOSC3-208ENST00000496910 ABRACLQ9P1F3 81 aa0.88□□□□□ -2.27
EXOSC3-208ENST00000496910 LINC01546A6NGU7 62 aa0.87□□□□□ -2.27
EXOSC3-208ENST00000496910 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
EXOSC3-208ENST00000496910 LINC00308Q8TCZ7 52 aa0.87□□□□□ -2.27
EXOSC3-208ENST00000496910 RPS27P42677 84 aaKnown RBP0.85□□□□□ -2.27
EXOSC3-208ENST00000496910 RPS27LQ71UM5 84 aaKnown RBP0.85□□□□□ -2.27
EXOSC3-208ENST00000496910 TMEM167BQ9NRX6 74 aa0.85□□□□□ -2.27
EXOSC3-208ENST00000496910 C6orf48Q9UBA6 75 aa0.85□□□□□ -2.27
EXOSC3-208ENST00000496910 TIMM8BQ9Y5J9 83 aaPredicted RBP0.85□□□□□ -2.27
EXOSC3-208ENST00000496910 WFDC10BQ8IUB3 73 aa0.83□□□□□ -2.28
EXOSC3-208ENST00000496910 A0A096LPF7 62 aa0.82□□□□□ -2.28
EXOSC3-208ENST00000496910 H3BNG1 76 aa0.8□□□□□ -2.28
EXOSC3-208ENST00000496910 APELAP0DMC3 54 aa0.78□□□□□ -2.28
EXOSC3-208ENST00000496910 WT1-ASQ06250 92 aa0.78□□□□□ -2.28
EXOSC3-208ENST00000496910 S4R3F8 94 aa0.76□□□□□ -2.29
EXOSC3-208ENST00000496910 DEFB131AP59861 70 aa0.75□□□□□ -2.29
EXOSC3-208ENST00000496910 SPINK1P00995 79 aa0.74□□□□□ -2.29
EXOSC3-208ENST00000496910 KRTAP19-8Q3LI54 63 aa0.74□□□□□ -2.29
EXOSC3-208ENST00000496910 TTTY10Q9BZA0 68 aa0.74□□□□□ -2.29
EXOSC3-208ENST00000496910 H3BUA1 57 aa0.73□□□□□ -2.29
EXOSC3-208ENST00000496910 LINC01556Q5JQF7 62 aa0.73□□□□□ -2.29
EXOSC3-208ENST00000496910 SMIM2Q9BVW6 85 aa0.72□□□□□ -2.29
EXOSC3-208ENST00000496910 LEAP2Q969E1 77 aa0.71□□□□□ -2.3
EXOSC3-208ENST00000496910 PRM1P04553 51 aa0.69□□□□□ -2.3
EXOSC3-208ENST00000496910 PRLHP81277 87 aa0.69□□□□□ -2.3
EXOSC3-208ENST00000496910 MT1GP13640 62 aa0.68□□□□□ -2.3
EXOSC3-208ENST00000496910 NDUFA1O15239 70 aa0.65□□□□□ -2.31
EXOSC3-208ENST00000496910 MT1MQ8N339 61 aa0.65□□□□□ -2.31
EXOSC3-208ENST00000496910 C9orf92A6NGG3 77 aa0.64□□□□□ -2.31
EXOSC3-208ENST00000496910 MT1XP80297 61 aa0.63□□□□□ -2.31
EXOSC3-208ENST00000496910 NOP10Q9NPE3 64 aaKnown RBP0.63□□□□□ -2.31
EXOSC3-208ENST00000496910 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
EXOSC3-208ENST00000496910 A0A096LNI7 61 aa0.61□□□□□ -2.31
EXOSC3-208ENST00000496910 MT1EP04732 61 aa0.61□□□□□ -2.31
EXOSC3-208ENST00000496910 RHPN1-AS1Q9BWJ2 59 aa0.61□□□□□ -2.31
EXOSC3-208ENST00000496910 IGLV5-48A0A075B6I7 105 aa0.6□□□□□ -2.31
EXOSC3-208ENST00000496910 MMP24-AS1A0A0U1RRL7 71 aa0.6□□□□□ -2.31
EXOSC3-208ENST00000496910 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
EXOSC3-208ENST00000496910 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
EXOSC3-208ENST00000496910 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
EXOSC3-208ENST00000496910 RPS29P62273 56 aaKnown RBP0.56□□□□□ -2.32
EXOSC3-208ENST00000496910 HTN1P15515 57 aa0.54□□□□□ -2.32
EXOSC3-208ENST00000496910 SNRPGP62308 76 aaKnown RBP0.54□□□□□ -2.32
EXOSC3-208ENST00000496910 DEFB1P60022 68 aa0.53□□□□□ -2.32
EXOSC3-208ENST00000496910 TMEM167AQ8TBQ9 72 aa0.5□□□□□ -2.33
EXOSC3-208ENST00000496910 M0QY20 66 aa0.49□□□□□ -2.33
EXOSC3-208ENST00000496910 A8MTW9 85 aa0.45□□□□□ -2.34
EXOSC3-208ENST00000496910 CLPSL2Q6UWE3 100 aa0.45□□□□□ -2.34
EXOSC3-208ENST00000496910 RPL39P62891 51 aaKnown RBP0.44□□□□□ -2.34
EXOSC3-208ENST00000496910 POLR2KP53803 58 aaKnown RBP0.43□□□□□ -2.34
EXOSC3-208ENST00000496910 PRCDQ00LT1 54 aa0.42□□□□□ -2.34
EXOSC3-208ENST00000496910 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
EXOSC3-208ENST00000496910 MT1LQ93083 61 aa0.42□□□□□ -2.34
EXOSC3-208ENST00000496910 M0QZ58 72 aa0.41□□□□□ -2.34
EXOSC3-208ENST00000496910 TNP1P09430 55 aa0.39□□□□□ -2.35
EXOSC3-208ENST00000496910 RPL39LQ96EH5 51 aaKnown RBP0.38□□□□□ -2.35
EXOSC3-208ENST00000496910 RPL39P5Q59GN2 51 aa0.37□□□□□ -2.35
EXOSC3-208ENST00000496910 MT1AP04731 61 aa0.34□□□□□ -2.36
EXOSC3-208ENST00000496910 K7EIM0 57 aa0.32□□□□□ -2.36
EXOSC3-208ENST00000496910 KRTAP19-5Q3LI72 72 aa0.32□□□□□ -2.36
EXOSC3-208ENST00000496910 TOMM7Q9P0U1 55 aa0.29□□□□□ -2.36
EXOSC3-208ENST00000496910 ARHGAP5-AS1Q96IT6 56 aa0.25□□□□□ -2.37
EXOSC3-208ENST00000496910 LINC01590Q5TEZ4 76 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 30.4 ms