RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 P0C880 135 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 SPRR2EP22531 72 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 SPRR2BP35325 72 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 SPRR2AP35326 72 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
VPS52-222ENST00000495981 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
VPS52-222ENST00000495981 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
VPS52-222ENST00000495981 SPINK7P58062 85 aa1.93□□□□□ -2.1
VPS52-222ENST00000495981 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
VPS52-222ENST00000495981 H0Y9P7 68 aa1.91□□□□□ -2.1
VPS52-222ENST00000495981 MT1BP07438 61 aa1.91□□□□□ -2.1
VPS52-222ENST00000495981 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
VPS52-222ENST00000495981 DMAC1Q96GE9 116 aa1.9□□□□□ -2.11
VPS52-222ENST00000495981 COA5Q86WW8 74 aa1.89□□□□□ -2.11
VPS52-222ENST00000495981 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
VPS52-222ENST00000495981 PRO2289Q9P1D8 64 aa1.89□□□□□ -2.11
VPS52-222ENST00000495981 UQCR11O14957 56 aa1.88□□□□□ -2.11
VPS52-222ENST00000495981 SPRR2DP22532 72 aa1.88□□□□□ -2.11
VPS52-222ENST00000495981 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
VPS52-222ENST00000495981 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
VPS52-222ENST00000495981 H1FX-AS1Q4G0G2 97 aa1.87□□□□□ -2.11
VPS52-222ENST00000495981 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
VPS52-222ENST00000495981 MMP24-AS1A0A0U1RRL7 71 aa1.86□□□□□ -2.11
VPS52-222ENST00000495981 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
VPS52-222ENST00000495981 MRPL34Q9BQ48 92 aaKnown RBP1.84□□□□□ -2.11
VPS52-222ENST00000495981 K7EQZ3 153 aa1.83□□□□□ -2.12
VPS52-222ENST00000495981 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
VPS52-222ENST00000495981 LCE3AQ5TA76 89 aa1.79□□□□□ -2.12
VPS52-222ENST00000495981 A0A1B0GU69 56 aa1.78□□□□□ -2.12
VPS52-222ENST00000495981 S4R3F8 94 aa1.78□□□□□ -2.12
VPS52-222ENST00000495981 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
VPS52-222ENST00000495981 TP53AIP1Q9HCN2 124 aa1.77□□□□□ -2.13
VPS52-222ENST00000495981 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
VPS52-222ENST00000495981 MT1XP80297 61 aa1.76□□□□□ -2.13
VPS52-222ENST00000495981 ACYP2P14621 99 aa1.75□□□□□ -2.13
VPS52-222ENST00000495981 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
VPS52-222ENST00000495981 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
VPS52-222ENST00000495981 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
VPS52-222ENST00000495981 MT4P47944 62 aa1.71□□□□□ -2.14
VPS52-222ENST00000495981 H0YAA0 97 aa1.7□□□□□ -2.14
VPS52-222ENST00000495981 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
VPS52-222ENST00000495981 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
VPS52-222ENST00000495981 PP632Q6XCG6 107 aa1.68□□□□□ -2.14
VPS52-222ENST00000495981 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
VPS52-222ENST00000495981 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
VPS52-222ENST00000495981 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
VPS52-222ENST00000495981 INE1O15225 51 aa1.62□□□□□ -2.15
VPS52-222ENST00000495981 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
VPS52-222ENST00000495981 M0QZ58 72 aa1.6□□□□□ -2.15
VPS52-222ENST00000495981 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
VPS52-222ENST00000495981 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
VPS52-222ENST00000495981 MT1EP04732 61 aa1.57□□□□□ -2.16
VPS52-222ENST00000495981 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
VPS52-222ENST00000495981 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
VPS52-222ENST00000495981 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
VPS52-222ENST00000495981 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
VPS52-222ENST00000495981 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
VPS52-222ENST00000495981 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
VPS52-222ENST00000495981 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
VPS52-222ENST00000495981 MT1MQ8N339 61 aa1.49□□□□□ -2.17
VPS52-222ENST00000495981 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
VPS52-222ENST00000495981 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
VPS52-222ENST00000495981 MT1GP13640 62 aa1.47□□□□□ -2.17
VPS52-222ENST00000495981 MT1LQ93083 61 aa1.47□□□□□ -2.17
VPS52-222ENST00000495981 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
VPS52-222ENST00000495981 A0A0D9SG42 100 aa1.42□□□□□ -2.18
VPS52-222ENST00000495981 TNP1P09430 55 aa1.35□□□□□ -2.19
VPS52-222ENST00000495981 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
VPS52-222ENST00000495981 MT1AP04731 61 aa1.25□□□□□ -2.21
VPS52-222ENST00000495981 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
VPS52-222ENST00000495981 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
VPS52-222ENST00000495981 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
VPS52-222ENST00000495981 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
VPS52-222ENST00000495981 PRM1P04553 51 aa0.88□□□□□ -2.27
VPS52-222ENST00000495981 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
VPS52-222ENST00000495981 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 157.7 ms