RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 C18orf32Q8TCD1 76 aa-0.95□□□□□ -2.56
SCN1A-206ENST00000491429 A0A087WXM4 84 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 EFCAB10A6NFE3 127 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 M0R1W7 72 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 NDUFB1O75438 58 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 GYPAP02724 150 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 ACBD7Q8N6N7 88 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 UBL5Q9BZL1 73 aa-0.96□□□□□ -2.56
SCN1A-206ENST00000491429 LINC01549A6NIU2 74 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 H3BSH0 61 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 S100PP25815 95 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 PKIAP61925 76 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 DEFB114Q30KQ6 69 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 SMIM5Q71RC9 77 aa-0.97□□□□□ -2.56
SCN1A-206ENST00000491429 UACAQ9BZF9 1416 aa-0.98□□□□□ -2.57
SCN1A-206ENST00000491429 H3BVH4 76 aa-0.98□□□□□ -2.57
SCN1A-206ENST00000491429 CD52P31358 61 aa-0.98□□□□□ -2.57
SCN1A-206ENST00000491429 ATP5EP2Q5VTU8 51 aa-0.98□□□□□ -2.57
SCN1A-206ENST00000491429 ST20Q9HBF5 79 aa-0.98□□□□□ -2.57
SCN1A-206ENST00000491429 ATP7AQ04656 1500 aa-0.99□□□□□ -2.57
SCN1A-206ENST00000491429 SMIM27A0A1W2PRY6 76 aa-0.99□□□□□ -2.57
SCN1A-206ENST00000491429 S100A8P05109 93 aa-0.99□□□□□ -2.57
SCN1A-206ENST00000491429 TOP2AP11388 1531 aaKnown RBP-0.99□□□□□ -2.57
SCN1A-206ENST00000491429 ANKARQ7Z5J8 1434 aa-1□□□□□ -2.57
SCN1A-206ENST00000491429 A0A096LNI7 61 aa-1.01□□□□□ -2.57
SCN1A-206ENST00000491429 MRPL33O75394 65 aaKnown RBP-1.01□□□□□ -2.57
SCN1A-206ENST00000491429 LINC01556Q5JQF7 62 aa-1.01□□□□□ -2.57
SCN1A-206ENST00000491429 PVALEFA0A1B0GWK0 134 aa-1.02□□□□□ -2.57
SCN1A-206ENST00000491429 DEFB108AA8MXU0 73 aa-1.02□□□□□ -2.57
SCN1A-206ENST00000491429 SMIM11AP58511 58 aa-1.02□□□□□ -2.57
SCN1A-206ENST00000491429 DEFB133Q30KQ1 61 aa-1.02□□□□□ -2.57
SCN1A-206ENST00000491429 PRXQ9BXM0 1461 aa-1.03□□□□□ -2.57
SCN1A-206ENST00000491429 HTN3P15516 51 aa-1.03□□□□□ -2.57
SCN1A-206ENST00000491429 ATXN8Q156A1 80 aa-1.03□□□□□ -2.57
SCN1A-206ENST00000491429 V9GYS6 101 aa-1.03□□□□□ -2.57
SCN1A-206ENST00000491429 KANTRA0A1W2PQU2 76 aa-1.04□□□□□ -2.58
SCN1A-206ENST00000491429 DEFB131AP59861 70 aa-1.04□□□□□ -2.58
SCN1A-206ENST00000491429 ADIRFQ15847 76 aa-1.04□□□□□ -2.58
SCN1A-206ENST00000491429 TMEM167BQ9NRX6 74 aa-1.05□□□□□ -2.58
SCN1A-206ENST00000491429 ABRACLQ9P1F3 81 aa-1.05□□□□□ -2.58
SCN1A-206ENST00000491429 HTN1P15515 57 aa-1.06□□□□□ -2.58
SCN1A-206ENST00000491429 DEFB108BQ8NET1 73 aa-1.06□□□□□ -2.58
SCN1A-206ENST00000491429 FANCD2Q9BXW9 1451 aa-1.06□□□□□ -2.58
SCN1A-206ENST00000491429 SMIM2Q9BVW6 85 aa-1.07□□□□□ -2.58
SCN1A-206ENST00000491429 NMES1Q9C002 83 aa-1.08□□□□□ -2.58
SCN1A-206ENST00000491429 Q9H521 79 aa-1.08□□□□□ -2.58
SCN1A-206ENST00000491429 NDUFA1O15239 70 aa-1.09□□□□□ -2.58
SCN1A-206ENST00000491429 APELAP0DMC3 54 aa-1.09□□□□□ -2.58
SCN1A-206ENST00000491429 RPL39P62891 51 aaKnown RBP-1.09□□□□□ -2.58
SCN1A-206ENST00000491429 S100A13Q99584 98 aa-1.09□□□□□ -2.58
SCN1A-206ENST00000491429 TOMM7Q9P0U1 55 aa-1.09□□□□□ -2.58
SCN1A-206ENST00000491429 H0YGX0 51 aa-1.1□□□□□ -2.59
SCN1A-206ENST00000491429 GNG2P59768 71 aa-1.1□□□□□ -2.59
SCN1A-206ENST00000491429 GNG13Q9P2W3 67 aa-1.1□□□□□ -2.59
SCN1A-206ENST00000491429 H3BUX3 64 aa-1.11□□□□□ -2.59
SCN1A-206ENST00000491429 RPL39LQ96EH5 51 aaKnown RBP-1.11□□□□□ -2.59
SCN1A-206ENST00000491429 A0A096LPF7 62 aa-1.12□□□□□ -2.59
SCN1A-206ENST00000491429 PDCD5O14737 125 aa-1.12□□□□□ -2.59
SCN1A-206ENST00000491429 LINC01590Q5TEZ4 76 aa-1.13□□□□□ -2.59
SCN1A-206ENST00000491429 RHPN1-AS1Q9BWJ2 59 aa-1.13□□□□□ -2.59
SCN1A-206ENST00000491429 SMCO4Q9NRQ5 59 aa-1.14□□□□□ -2.59
SCN1A-206ENST00000491429 PLNP26678 52 aa-1.15□□□□□ -2.59
SCN1A-206ENST00000491429 A0A087WWC5 75 aa-1.16□□□□□ -2.6
SCN1A-206ENST00000491429 SERF2P84101 59 aa-1.18□□□□□ -2.6
SCN1A-206ENST00000491429 COX14Q96I36 57 aa-1.18□□□□□ -2.6
SCN1A-206ENST00000491429 CMC2Q9NRP2 79 aa-1.2□□□□□ -2.6
SCN1A-206ENST00000491429 S100ZQ8WXG8 99 aa-1.22□□□□□ -2.6
SCN1A-206ENST00000491429 GCC2Q8IWJ2 1684 aa-1.24□□□□□ -2.61
SCN1A-206ENST00000491429 K7EIM0 57 aa-1.26□□□□□ -2.61
SCN1A-206ENST00000491429 Q9Y3F1 56 aa-1.26□□□□□ -2.61
SCN1A-206ENST00000491429 SNRPGP15A8MWD9 76 aa-1.3□□□□□ -2.62
SCN1A-206ENST00000491429 RPL39P5Q59GN2 51 aa-1.33□□□□□ -2.62
SCN1A-206ENST00000491429 ARHGAP5-AS1Q96IT6 56 aa-1.33□□□□□ -2.62
SCN1A-206ENST00000491429 SMIM31A0A1B0GVY4 71 aa-1.34□□□□□ -2.62
SCN1A-206ENST00000491429 PRCDQ00LT1 54 aa-1.35□□□□□ -2.63
SCN1A-206ENST00000491429 TMEM167AQ8TBQ9 72 aa-1.35□□□□□ -2.63
SCN1A-206ENST00000491429 TOMM5Q8N4H5 51 aa-1.36□□□□□ -2.63
SCN1A-206ENST00000491429 SNRPGP62308 76 aaKnown RBP-1.43□□□□□ -2.64
Retrieved 78 of 20,778 RNA–protein pairs in 44.5 ms