RNA–Protein interactions for RNA: ENST00000484389.6

TDRD3-207, Transcript of tudor domain containing 3, humanhuman

TSL 2

Gene TDRD3, Length 1,863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-207ENST00000484389 FAT2Q9NYQ8 4349 aa2.19□□□□□ -2.06
TDRD3-207ENST00000484389 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
TDRD3-207ENST00000484389 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
TDRD3-207ENST00000484389 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
TDRD3-207ENST00000484389 KRTAP10-1P60331 282 aa2.16□□□□□ -2.06
TDRD3-207ENST00000484389 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
TDRD3-207ENST00000484389 USH2AO75445 5202 aa2.15□□□□□ -2.07
TDRD3-207ENST00000484389 LRP1BQ9NZR2 4599 aa2.15□□□□□ -2.07
TDRD3-207ENST00000484389 PLECQ15149 4684 aaKnown RBP2.14□□□□□ -2.07
TDRD3-207ENST00000484389 LRP2P98164 4655 aa2.13□□□□□ -2.07
TDRD3-207ENST00000484389 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
TDRD3-207ENST00000484389 PKD1P98161 4303 aa2.13□□□□□ -2.07
TDRD3-207ENST00000484389 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
TDRD3-207ENST00000484389 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
TDRD3-207ENST00000484389 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
TDRD3-207ENST00000484389 VPS13BQ7Z7G8 4022 aa2.09□□□□□ -2.07
TDRD3-207ENST00000484389 FAT1Q14517 4588 aa2.08□□□□□ -2.08
TDRD3-207ENST00000484389 STARD9Q9P2P6 4700 aa2.08□□□□□ -2.08
TDRD3-207ENST00000484389 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
TDRD3-207ENST00000484389 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
TDRD3-207ENST00000484389 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
TDRD3-207ENST00000484389 DNAH5Q8TE73 4624 aa2.05□□□□□ -2.08
TDRD3-207ENST00000484389 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
TDRD3-207ENST00000484389 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
TDRD3-207ENST00000484389 TNXBP22105 4242 aa2.03□□□□□ -2.09
TDRD3-207ENST00000484389 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
TDRD3-207ENST00000484389 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
TDRD3-207ENST00000484389 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.1
TDRD3-207ENST00000484389 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
TDRD3-207ENST00000484389 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
TDRD3-207ENST00000484389 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
TDRD3-207ENST00000484389 M0R2T5 61 aa1.91□□□□□ -2.1
TDRD3-207ENST00000484389 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
TDRD3-207ENST00000484389 LPAP08519 4548 aa1.91□□□□□ -2.1
TDRD3-207ENST00000484389 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
TDRD3-207ENST00000484389 SMR3BP02814 79 aaPredicted RBP1.9□□□□□ -2.1
TDRD3-207ENST00000484389 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
TDRD3-207ENST00000484389 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
TDRD3-207ENST00000484389 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.12
TDRD3-207ENST00000484389 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
TDRD3-207ENST00000484389 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
TDRD3-207ENST00000484389 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
TDRD3-207ENST00000484389 PRM1P04553 51 aa1.73□□□□□ -2.13
TDRD3-207ENST00000484389 KRTAP19-2Q3LHN2 52 aa1.72□□□□□ -2.13
TDRD3-207ENST00000484389 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
TDRD3-207ENST00000484389 MT1XP80297 61 aa1.65□□□□□ -2.14
TDRD3-207ENST00000484389 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.14
TDRD3-207ENST00000484389 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
TDRD3-207ENST00000484389 MT1HL1P0DM35 61 aa1.62□□□□□ -2.15
TDRD3-207ENST00000484389 SPRR2EP22531 72 aa1.58□□□□□ -2.16
TDRD3-207ENST00000484389 SPRR2BP35325 72 aa1.58□□□□□ -2.16
TDRD3-207ENST00000484389 SPRR2AP35326 72 aa1.58□□□□□ -2.16
TDRD3-207ENST00000484389 KRTAP19-8Q3LI54 63 aa1.57□□□□□ -2.16
TDRD3-207ENST00000484389 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
TDRD3-207ENST00000484389 SPRR2DP22532 72 aa1.54□□□□□ -2.16
TDRD3-207ENST00000484389 MT1BP07438 61 aa1.54□□□□□ -2.16
TDRD3-207ENST00000484389 MT1AP04731 61 aa1.52□□□□□ -2.17
TDRD3-207ENST00000484389 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
TDRD3-207ENST00000484389 MT1EP04732 61 aa1.47□□□□□ -2.17
TDRD3-207ENST00000484389 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
TDRD3-207ENST00000484389 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
TDRD3-207ENST00000484389 MT1LQ93083 61 aa1.47□□□□□ -2.17
TDRD3-207ENST00000484389 MT1FP04733 61 aa1.46□□□□□ -2.18
TDRD3-207ENST00000484389 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
TDRD3-207ENST00000484389 MT2AP02795 61 aa1.44□□□□□ -2.18
TDRD3-207ENST00000484389 MT4P47944 62 aa1.44□□□□□ -2.18
TDRD3-207ENST00000484389 MT1GP13640 62 aa1.43□□□□□ -2.18
TDRD3-207ENST00000484389 MT1HP80294 61 aa1.37□□□□□ -2.19
TDRD3-207ENST00000484389 SPRR2FQ96RM1 72 aa1.37□□□□□ -2.19
TDRD3-207ENST00000484389 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
TDRD3-207ENST00000484389 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
TDRD3-207ENST00000484389 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
TDRD3-207ENST00000484389 MT1MQ8N339 61 aa1.26□□□□□ -2.21
TDRD3-207ENST00000484389 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
TDRD3-207ENST00000484389 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
TDRD3-207ENST00000484389 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
TDRD3-207ENST00000484389 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
TDRD3-207ENST00000484389 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 42.7 ms