RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SPRR2EP22531 72 aa3.2□□□□□ -1.9
CSDE1-206ENST00000483030 SPRR2BP35325 72 aa3.2□□□□□ -1.9
CSDE1-206ENST00000483030 SPRR2AP35326 72 aa3.2□□□□□ -1.9
CSDE1-206ENST00000483030 Q8N9L7 120 aa3.2□□□□□ -1.9
CSDE1-206ENST00000483030 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
CSDE1-206ENST00000483030 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
CSDE1-206ENST00000483030 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
CSDE1-206ENST00000483030 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
CSDE1-206ENST00000483030 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
CSDE1-206ENST00000483030 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
CSDE1-206ENST00000483030 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
CSDE1-206ENST00000483030 ACYP2P14621 99 aa3.11□□□□□ -1.91
CSDE1-206ENST00000483030 SPRR2DP22532 72 aa3.1□□□□□ -1.91
CSDE1-206ENST00000483030 MT1XP80297 61 aa3.1□□□□□ -1.91
CSDE1-206ENST00000483030 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
CSDE1-206ENST00000483030 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
CSDE1-206ENST00000483030 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
CSDE1-206ENST00000483030 H0YAA0 97 aa3.04□□□□□ -1.92
CSDE1-206ENST00000483030 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
CSDE1-206ENST00000483030 R4GN34 69 aa3.04□□□□□ -1.92
CSDE1-206ENST00000483030 MT3P25713 68 aa2.99□□□□□ -1.93
CSDE1-206ENST00000483030 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
CSDE1-206ENST00000483030 INE1O15225 51 aa2.95□□□□□ -1.94
CSDE1-206ENST00000483030 M0QZ58 72 aa2.94□□□□□ -1.94
CSDE1-206ENST00000483030 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
CSDE1-206ENST00000483030 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
CSDE1-206ENST00000483030 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CSDE1-206ENST00000483030 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CSDE1-206ENST00000483030 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CSDE1-206ENST00000483030 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CSDE1-206ENST00000483030 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
CSDE1-206ENST00000483030 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
CSDE1-206ENST00000483030 MT1EP04732 61 aa2.76□□□□□ -1.97
CSDE1-206ENST00000483030 MT4P47944 62 aa2.74□□□□□ -1.97
CSDE1-206ENST00000483030 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CSDE1-206ENST00000483030 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
CSDE1-206ENST00000483030 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
CSDE1-206ENST00000483030 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
CSDE1-206ENST00000483030 MT1GP13640 62 aa2.69□□□□□ -1.98
CSDE1-206ENST00000483030 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
CSDE1-206ENST00000483030 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
CSDE1-206ENST00000483030 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
CSDE1-206ENST00000483030 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
CSDE1-206ENST00000483030 A0A0D9SG42 100 aa2.64□□□□□ -1.99
CSDE1-206ENST00000483030 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CSDE1-206ENST00000483030 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
CSDE1-206ENST00000483030 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CSDE1-206ENST00000483030 MT1LQ93083 61 aa2.6□□□□□ -1.99
CSDE1-206ENST00000483030 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
CSDE1-206ENST00000483030 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CSDE1-206ENST00000483030 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CSDE1-206ENST00000483030 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
CSDE1-206ENST00000483030 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CSDE1-206ENST00000483030 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
CSDE1-206ENST00000483030 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
CSDE1-206ENST00000483030 TNP1P09430 55 aa2.43□□□□□ -2.02
CSDE1-206ENST00000483030 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-206ENST00000483030 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.02
CSDE1-206ENST00000483030 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
CSDE1-206ENST00000483030 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
CSDE1-206ENST00000483030 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
CSDE1-206ENST00000483030 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CSDE1-206ENST00000483030 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
CSDE1-206ENST00000483030 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
CSDE1-206ENST00000483030 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
CSDE1-206ENST00000483030 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-206ENST00000483030 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
CSDE1-206ENST00000483030 MT1AP04731 61 aa2.2□□□□□ -2.06
CSDE1-206ENST00000483030 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
CSDE1-206ENST00000483030 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
CSDE1-206ENST00000483030 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
CSDE1-206ENST00000483030 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
CSDE1-206ENST00000483030 PRM1P04553 51 aa1.59□□□□□ -2.15
CSDE1-206ENST00000483030 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CSDE1-206ENST00000483030 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CSDE1-206ENST00000483030 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CSDE1-206ENST00000483030 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
CSDE1-206ENST00000483030 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms