RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 Q6JHZ5 121 aa1.43□□□□□ -2.18
SHQ1-208ENST00000482785 GTF2H5Q6ZYL4 71 aa1.43□□□□□ -2.18
SHQ1-208ENST00000482785 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
SHQ1-208ENST00000482785 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
SHQ1-208ENST00000482785 SPCS1Q9Y6A9 102 aa1.42□□□□□ -2.18
SHQ1-208ENST00000482785 K7EP34 96 aa1.41□□□□□ -2.18
SHQ1-208ENST00000482785 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
SHQ1-208ENST00000482785 DSCR8Q96T75 97 aa1.41□□□□□ -2.18
SHQ1-208ENST00000482785 TRBV7-4A0A0J9YYF1 115 aa1.4□□□□□ -2.19
SHQ1-208ENST00000482785 TRBV7-7A0A0K0K1E9 115 aa1.4□□□□□ -2.19
SHQ1-208ENST00000482785 CCKP06307 115 aa1.4□□□□□ -2.19
SHQ1-208ENST00000482785 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
SHQ1-208ENST00000482785 NREPQ16612 68 aa1.37□□□□□ -2.19
SHQ1-208ENST00000482785 ETDBQ3ZM63 59 aa1.37□□□□□ -2.19
SHQ1-208ENST00000482785 LINC00472Q9H8W2 130 aa1.37□□□□□ -2.19
SHQ1-208ENST00000482785 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
SHQ1-208ENST00000482785 NDUFB1O75438 58 aa1.36□□□□□ -2.19
SHQ1-208ENST00000482785 ACYP1P07311 99 aa1.36□□□□□ -2.19
SHQ1-208ENST00000482785 Q96NJ1 140 aa1.36□□□□□ -2.19
SHQ1-208ENST00000482785 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
SHQ1-208ENST00000482785 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SHQ1-208ENST00000482785 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
SHQ1-208ENST00000482785 LINC00643Q86TS7 51 aa1.33□□□□□ -2.2
SHQ1-208ENST00000482785 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
SHQ1-208ENST00000482785 ATP5EP2Q5VTU8 51 aa1.32□□□□□ -2.2
SHQ1-208ENST00000482785 K7EQZ3 153 aa1.31□□□□□ -2.2
SHQ1-208ENST00000482785 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
SHQ1-208ENST00000482785 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
SHQ1-208ENST00000482785 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 ATP5EP56381 51 aaPredicted RBP1.3□□□□□ -2.2
SHQ1-208ENST00000482785 SPINK7P58062 85 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 KLKP1Q107X0 134 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 C20orf197Q8N268 126 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
SHQ1-208ENST00000482785 MT-ATP8P03928 68 aa1.29□□□□□ -2.2
SHQ1-208ENST00000482785 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
SHQ1-208ENST00000482785 MT1XP80297 61 aa1.28□□□□□ -2.2
SHQ1-208ENST00000482785 CYP4F30PQ9H0H9 118 aa1.28□□□□□ -2.2
SHQ1-208ENST00000482785 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
SHQ1-208ENST00000482785 A0A087WVE0 104 aa1.26□□□□□ -2.21
SHQ1-208ENST00000482785 ATOX1O00244 68 aa1.26□□□□□ -2.21
SHQ1-208ENST00000482785 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
SHQ1-208ENST00000482785 TRAV22A0A0B4J277 110 aa1.25□□□□□ -2.21
SHQ1-208ENST00000482785 H0Y9P7 68 aa1.24□□□□□ -2.21
SHQ1-208ENST00000482785 SERP2Q8N6R1 65 aa1.23□□□□□ -2.21
SHQ1-208ENST00000482785 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
SHQ1-208ENST00000482785 NDUFC1O43677 76 aa1.2□□□□□ -2.22
SHQ1-208ENST00000482785 ACYP2P14621 99 aa1.19□□□□□ -2.22
SHQ1-208ENST00000482785 S4R3F8 94 aa1.19□□□□□ -2.22
SHQ1-208ENST00000482785 H0YAA0 97 aa1.18□□□□□ -2.22
SHQ1-208ENST00000482785 MT1MQ8N339 61 aa1.18□□□□□ -2.22
SHQ1-208ENST00000482785 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
SHQ1-208ENST00000482785 H7BZZ5 65 aa1.17□□□□□ -2.22
SHQ1-208ENST00000482785 MT1EP04732 61 aa1.17□□□□□ -2.22
SHQ1-208ENST00000482785 MT1GP13640 62 aa1.17□□□□□ -2.22
SHQ1-208ENST00000482785 CHKB-CPT1BH3BT56 60 aa1.16□□□□□ -2.22
SHQ1-208ENST00000482785 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
SHQ1-208ENST00000482785 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.23
SHQ1-208ENST00000482785 M0QZ58 72 aa1.1□□□□□ -2.23
SHQ1-208ENST00000482785 UQCR11O14957 56 aa1.1□□□□□ -2.23
SHQ1-208ENST00000482785 A0A1B0GU69 56 aa1.09□□□□□ -2.23
SHQ1-208ENST00000482785 PRR15LQ9BU68 103 aa1.09□□□□□ -2.23
SHQ1-208ENST00000482785 LINC01558Q9Y6Z2 57 aa1.09□□□□□ -2.23
SHQ1-208ENST00000482785 SPATA8Q6RVD6 105 aa1.04□□□□□ -2.24
SHQ1-208ENST00000482785 A0A0D9SG42 100 aa1.03□□□□□ -2.24
SHQ1-208ENST00000482785 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
SHQ1-208ENST00000482785 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
SHQ1-208ENST00000482785 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
SHQ1-208ENST00000482785 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
SHQ1-208ENST00000482785 MT1LQ93083 61 aa0.98□□□□□ -2.25
SHQ1-208ENST00000482785 TNP1P09430 55 aa0.97□□□□□ -2.25
SHQ1-208ENST00000482785 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
SHQ1-208ENST00000482785 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
SHQ1-208ENST00000482785 MT1AP04731 61 aa0.81□□□□□ -2.28
SHQ1-208ENST00000482785 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
SHQ1-208ENST00000482785 PRM1P04553 51 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 51.5 ms