RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 DMXL2Q8TDJ6 3036 aa0.31□□□□□ -2.36
RBM39-233ENST00000482563 FREM2Q5SZK8 3169 aa0.31□□□□□ -2.36
RBM39-233ENST00000482563 LOC400499M0QZD8 3231 aa0.3□□□□□ -2.36
RBM39-233ENST00000482563 CENPEQ02224 2701 aa0.3□□□□□ -2.36
RBM39-233ENST00000482563 SMR3BP02814 79 aaPredicted RBP0.3□□□□□ -2.36
RBM39-233ENST00000482563 MUC3AQ02505 3323 aa0.29□□□□□ -2.36
RBM39-233ENST00000482563 FRYLO94915 3013 aa0.29□□□□□ -2.36
RBM39-233ENST00000482563 ADGRG4Q8IZF6 3080 aa0.29□□□□□ -2.36
RBM39-233ENST00000482563 MGAQ8IWI9 3026 aa0.26□□□□□ -2.37
RBM39-233ENST00000482563 VPS13AQ96RL7 3174 aa0.26□□□□□ -2.37
RBM39-233ENST00000482563 UTRNP46939 3433 aa0.25□□□□□ -2.37
RBM39-233ENST00000482563 VPS13CQ709C8 3753 aa0.25□□□□□ -2.37
RBM39-233ENST00000482563 CSMD2Q7Z408 3487 aa0.25□□□□□ -2.37
RBM39-233ENST00000482563 DNAH14Q0VDD8 3507 aa0.25□□□□□ -2.37
RBM39-233ENST00000482563 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
RBM39-233ENST00000482563 WDFY3Q8IZQ1 3526 aa0.24□□□□□ -2.37
RBM39-233ENST00000482563 ATMQ13315 3056 aa0.21□□□□□ -2.38
RBM39-233ENST00000482563 PRUNE2Q8WUY3 3088 aa0.21□□□□□ -2.38
RBM39-233ENST00000482563 PLECQ15149 4684 aaKnown RBP0.21□□□□□ -2.38
RBM39-233ENST00000482563 XIRP2A4UGR9 3374 aa0.2□□□□□ -2.38
RBM39-233ENST00000482563 SMG1Q96Q15 3661 aaKnown RBP0.2□□□□□ -2.38
RBM39-233ENST00000482563 ARHGAP5-AS1Q96IT6 56 aa0.2□□□□□ -2.38
RBM39-233ENST00000482563 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
RBM39-233ENST00000482563 CDH23Q9H251 3354 aa0.2□□□□□ -2.38
RBM39-233ENST00000482563 KRTAP19-6Q3LI70 58 aa0.19□□□□□ -2.38
RBM39-233ENST00000482563 STARD9Q9P2P6 4700 aa0.19□□□□□ -2.38
RBM39-233ENST00000482563 GOLGB1Q14789 3259 aaKnown RBP0.18□□□□□ -2.38
RBM39-233ENST00000482563 MT4P47944 62 aa0.16□□□□□ -2.38
RBM39-233ENST00000482563 DYNC1H1Q14204 4646 aaKnown RBP0.16□□□□□ -2.38
RBM39-233ENST00000482563 DEFB104AQ8WTQ1 72 aa0.13□□□□□ -2.39
RBM39-233ENST00000482563 CMYA5Q8N3K9 4069 aa0.11□□□□□ -2.39
RBM39-233ENST00000482563 MUC17Q685J3 4493 aa0.06□□□□□ -2.4
RBM39-233ENST00000482563 DEFB1P60022 68 aa0.06□□□□□ -2.4
RBM39-233ENST00000482563 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
RBM39-233ENST00000482563 DMDP11532 3685 aa0.05□□□□□ -2.4
RBM39-233ENST00000482563 LINC01590Q5TEZ4 76 aa0.04□□□□□ -2.4
RBM39-233ENST00000482563 TRRAPQ9Y4A5 3859 aa0.03□□□□□ -2.4
RBM39-233ENST00000482563 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
RBM39-233ENST00000482563 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
RBM39-233ENST00000482563 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
RBM39-233ENST00000482563 TTTY10Q9BZA0 68 aa-0.05□□□□□ -2.42
RBM39-233ENST00000482563 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
RBM39-233ENST00000482563 MT1HP80294 61 aa-0.09□□□□□ -2.42
RBM39-233ENST00000482563 PRCDQ00LT1 54 aa-0.11□□□□□ -2.43
RBM39-233ENST00000482563 KRTAP19-8Q3LI54 63 aa-0.16□□□□□ -2.44
RBM39-233ENST00000482563 H3BSH0 61 aa-0.2□□□□□ -2.44
RBM39-233ENST00000482563 K7EIM0 57 aa-0.21□□□□□ -2.44
RBM39-233ENST00000482563 MT1BP07438 61 aa-0.21□□□□□ -2.44
RBM39-233ENST00000482563 MT1EP04732 61 aa-0.22□□□□□ -2.44
RBM39-233ENST00000482563 MT1HL1P0DM35 61 aa-0.27□□□□□ -2.45
RBM39-233ENST00000482563 MT1FP04733 61 aa-0.28□□□□□ -2.45
RBM39-233ENST00000482563 DEFB136Q30KP8 78 aa-0.3□□□□□ -2.46
RBM39-233ENST00000482563 MT2AP02795 61 aa-0.3□□□□□ -2.46
RBM39-233ENST00000482563 RHPN1-AS1Q9BWJ2 59 aa-0.31□□□□□ -2.46
RBM39-233ENST00000482563 KRTAP19-2Q3LHN2 52 aa-0.32□□□□□ -2.46
RBM39-233ENST00000482563 DEFB124Q8NES8 71 aa-0.32□□□□□ -2.46
RBM39-233ENST00000482563 A0A096LNI7 61 aa-0.33□□□□□ -2.46
RBM39-233ENST00000482563 MT1LQ93083 61 aa-0.33□□□□□ -2.46
RBM39-233ENST00000482563 MT1GP13640 62 aa-0.35□□□□□ -2.47
RBM39-233ENST00000482563 MT1MQ8N339 61 aa-0.36□□□□□ -2.47
RBM39-233ENST00000482563 MT1XP80297 61 aa-0.37□□□□□ -2.47
RBM39-233ENST00000482563 RPS29P62273 56 aaKnown RBP-0.46□□□□□ -2.48
RBM39-233ENST00000482563 TMEM167AQ8TBQ9 72 aa-0.46□□□□□ -2.48
RBM39-233ENST00000482563 DEFB4AO15263 64 aa-0.5□□□□□ -2.49
RBM39-233ENST00000482563 STATHP02808 62 aa-0.55□□□□□ -2.5
RBM39-233ENST00000482563 H3BUX3 64 aa-0.58□□□□□ -2.5
RBM39-233ENST00000482563 RPL39P5Q59GN2 51 aa-0.61□□□□□ -2.51
RBM39-233ENST00000482563 HTN1P15515 57 aa-0.61□□□□□ -2.51
RBM39-233ENST00000482563 DEFB133Q30KQ1 61 aa-0.66□□□□□ -2.51
RBM39-233ENST00000482563 CD52P31358 61 aa-0.73□□□□□ -2.53
RBM39-233ENST00000482563 DEFB108AA8MXU0 73 aa-0.74□□□□□ -2.53
RBM39-233ENST00000482563 LINC01556Q5JQF7 62 aa-0.81□□□□□ -2.54
RBM39-233ENST00000482563 HTN3P15516 51 aa-0.82□□□□□ -2.54
RBM39-233ENST00000482563 DEFB108BQ8NET1 73 aa-0.83□□□□□ -2.54
RBM39-233ENST00000482563 COX14Q96I36 57 aa-0.89□□□□□ -2.55
RBM39-233ENST00000482563 A0A096LPF7 62 aa-0.9□□□□□ -2.55
RBM39-233ENST00000482563 APELAP0DMC3 54 aa-0.9□□□□□ -2.55
RBM39-233ENST00000482563 Q9Y3F1 56 aa-0.92□□□□□ -2.56
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms