RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
SEC61B-202ENST00000481573 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
SEC61B-202ENST00000481573 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
SEC61B-202ENST00000481573 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
SEC61B-202ENST00000481573 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SEC61B-202ENST00000481573 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
SEC61B-202ENST00000481573 K7ERS5 55 aa5.2□□□□□ -1.58
SEC61B-202ENST00000481573 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
SEC61B-202ENST00000481573 TNP1P09430 55 aa5.08□□□□□ -1.6
SEC61B-202ENST00000481573 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
SEC61B-202ENST00000481573 SPRR2EP22531 72 aa5.03□□□□□ -1.6
SEC61B-202ENST00000481573 SPRR2BP35325 72 aa5.03□□□□□ -1.6
SEC61B-202ENST00000481573 SPRR2AP35326 72 aa5.03□□□□□ -1.6
SEC61B-202ENST00000481573 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
SEC61B-202ENST00000481573 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SEC61B-202ENST00000481573 ROMO1P60602 79 aa4.99□□□□□ -1.61
SEC61B-202ENST00000481573 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SEC61B-202ENST00000481573 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
SEC61B-202ENST00000481573 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
SEC61B-202ENST00000481573 MT1EP04732 61 aa4.88□□□□□ -1.63
SEC61B-202ENST00000481573 SPRR2DP22532 72 aa4.87□□□□□ -1.63
SEC61B-202ENST00000481573 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
SEC61B-202ENST00000481573 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
SEC61B-202ENST00000481573 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
SEC61B-202ENST00000481573 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
SEC61B-202ENST00000481573 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
SEC61B-202ENST00000481573 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
SEC61B-202ENST00000481573 MT1LQ93083 61 aa4.73□□□□□ -1.65
SEC61B-202ENST00000481573 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
SEC61B-202ENST00000481573 MT1GP13640 62 aa4.65□□□□□ -1.67
SEC61B-202ENST00000481573 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
SEC61B-202ENST00000481573 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
SEC61B-202ENST00000481573 MT1MQ8N339 61 aa4.61□□□□□ -1.67
SEC61B-202ENST00000481573 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
SEC61B-202ENST00000481573 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
SEC61B-202ENST00000481573 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
SEC61B-202ENST00000481573 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
SEC61B-202ENST00000481573 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SEC61B-202ENST00000481573 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
SEC61B-202ENST00000481573 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
SEC61B-202ENST00000481573 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
SEC61B-202ENST00000481573 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
SEC61B-202ENST00000481573 MT4P47944 62 aa4.35□□□□□ -1.71
SEC61B-202ENST00000481573 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SEC61B-202ENST00000481573 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
SEC61B-202ENST00000481573 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
SEC61B-202ENST00000481573 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
SEC61B-202ENST00000481573 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
SEC61B-202ENST00000481573 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
SEC61B-202ENST00000481573 MT3P25713 68 aa4.03□□□□□ -1.76
SEC61B-202ENST00000481573 MT1AP04731 61 aa4.01□□□□□ -1.77
SEC61B-202ENST00000481573 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
SEC61B-202ENST00000481573 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
SEC61B-202ENST00000481573 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
SEC61B-202ENST00000481573 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SEC61B-202ENST00000481573 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SEC61B-202ENST00000481573 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
SEC61B-202ENST00000481573 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
SEC61B-202ENST00000481573 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SEC61B-202ENST00000481573 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
SEC61B-202ENST00000481573 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
SEC61B-202ENST00000481573 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
SEC61B-202ENST00000481573 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
SEC61B-202ENST00000481573 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SEC61B-202ENST00000481573 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SEC61B-202ENST00000481573 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
SEC61B-202ENST00000481573 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SEC61B-202ENST00000481573 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
SEC61B-202ENST00000481573 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
SEC61B-202ENST00000481573 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SEC61B-202ENST00000481573 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
SEC61B-202ENST00000481573 INE1O15225 51 aa2.77□□□□□ -1.97
SEC61B-202ENST00000481573 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SEC61B-202ENST00000481573 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
SEC61B-202ENST00000481573 PRM1P04553 51 aa2.6□□□□□ -1.99
SEC61B-202ENST00000481573 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SEC61B-202ENST00000481573 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
SEC61B-202ENST00000481573 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms