RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SPRR4Q96PI1 79 aa2.08□□□□□ -2.08
CCDC171-207ENST00000478913 PLAC8Q9NZF1 115 aa2.08□□□□□ -2.08
CCDC171-207ENST00000478913 LOC101927531A0A1B0GV80 90 aa2.07□□□□□ -2.08
CCDC171-207ENST00000478913 PCOTHQ58A44 107 aa2.07□□□□□ -2.08
CCDC171-207ENST00000478913 WFDC13Q8IUB5 93 aa2.07□□□□□ -2.08
CCDC171-207ENST00000478913 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
CCDC171-207ENST00000478913 K7EQZ3 153 aa2.06□□□□□ -2.08
CCDC171-207ENST00000478913 C9orf163Q8N9P6 203 aa2.06□□□□□ -2.08
CCDC171-207ENST00000478913 Q8NDZ9 215 aa2.06□□□□□ -2.08
CCDC171-207ENST00000478913 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 A8MWP4 228 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 Q5VV11 94 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 COA5Q86WW8 74 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 SPACA4Q8TDM5 124 aa2.05□□□□□ -2.08
CCDC171-207ENST00000478913 A0A087WSZ3 146 aa2.04□□□□□ -2.08
CCDC171-207ENST00000478913 SPRR1AP35321 89 aa2.03□□□□□ -2.08
CCDC171-207ENST00000478913 LINC01558Q9Y6Z2 57 aa2.03□□□□□ -2.08
CCDC171-207ENST00000478913 ACYP2P14621 99 aa2.02□□□□□ -2.09
CCDC171-207ENST00000478913 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
CCDC171-207ENST00000478913 A0A1B0GU69 56 aa2□□□□□ -2.09
CCDC171-207ENST00000478913 A0A1B0GU33 70 aa1.99□□□□□ -2.09
CCDC171-207ENST00000478913 SPRR1BP22528 89 aa1.99□□□□□ -2.09
CCDC171-207ENST00000478913 KRTAP26-1Q6PEX3 210 aa1.99□□□□□ -2.09
CCDC171-207ENST00000478913 UQCR11O14957 56 aa1.98□□□□□ -2.09
CCDC171-207ENST00000478913 PRLHP81277 87 aa1.98□□□□□ -2.09
CCDC171-207ENST00000478913 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
CCDC171-207ENST00000478913 MRPL34Q9BQ48 92 aaKnown RBP1.98□□□□□ -2.09
CCDC171-207ENST00000478913 LINC00472Q9H8W2 130 aa1.98□□□□□ -2.09
CCDC171-207ENST00000478913 MMP24-AS1A0A0U1RRL7 71 aa1.97□□□□□ -2.09
CCDC171-207ENST00000478913 A0A096LNI7 61 aa1.96□□□□□ -2.1
CCDC171-207ENST00000478913 ROMO1P60602 79 aa1.96□□□□□ -2.1
CCDC171-207ENST00000478913 MIR22HGQ0VDD5 57 aa1.96□□□□□ -2.1
CCDC171-207ENST00000478913 SPINK7P58062 85 aa1.95□□□□□ -2.1
CCDC171-207ENST00000478913 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
CCDC171-207ENST00000478913 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
CCDC171-207ENST00000478913 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
CCDC171-207ENST00000478913 DMAC1Q96GE9 116 aa1.92□□□□□ -2.1
CCDC171-207ENST00000478913 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
CCDC171-207ENST00000478913 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
CCDC171-207ENST00000478913 CSAG1Q6PB30 78 aa1.88□□□□□ -2.11
CCDC171-207ENST00000478913 Q96NJ1 140 aa1.88□□□□□ -2.11
CCDC171-207ENST00000478913 SPINK1P00995 79 aa1.85□□□□□ -2.11
CCDC171-207ENST00000478913 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
CCDC171-207ENST00000478913 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
CCDC171-207ENST00000478913 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
CCDC171-207ENST00000478913 C9orf92A6NGG3 77 aa1.78□□□□□ -2.12
CCDC171-207ENST00000478913 RPS29P62273 56 aaKnown RBP1.78□□□□□ -2.12
CCDC171-207ENST00000478913 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
CCDC171-207ENST00000478913 MT1BP07438 61 aa1.76□□□□□ -2.13
CCDC171-207ENST00000478913 H0YAA0 97 aa1.75□□□□□ -2.13
CCDC171-207ENST00000478913 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
CCDC171-207ENST00000478913 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
CCDC171-207ENST00000478913 A0A0D9SG42 100 aa1.7□□□□□ -2.14
CCDC171-207ENST00000478913 S4R3F8 94 aa1.7□□□□□ -2.14
CCDC171-207ENST00000478913 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
CCDC171-207ENST00000478913 M0QZ58 72 aa1.67□□□□□ -2.14
CCDC171-207ENST00000478913 INE1O15225 51 aa1.62□□□□□ -2.15
CCDC171-207ENST00000478913 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
CCDC171-207ENST00000478913 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CCDC171-207ENST00000478913 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CCDC171-207ENST00000478913 KRTAP19-8Q3LI54 63 aa1.57□□□□□ -2.16
CCDC171-207ENST00000478913 TNP1P09430 55 aa1.51□□□□□ -2.17
CCDC171-207ENST00000478913 KRTAP19-3Q7Z4W3 81 aa1.49□□□□□ -2.17
CCDC171-207ENST00000478913 MT1XP80297 61 aa1.43□□□□□ -2.18
CCDC171-207ENST00000478913 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
CCDC171-207ENST00000478913 MT1GP13640 62 aa1.34□□□□□ -2.19
CCDC171-207ENST00000478913 MT1MQ8N339 61 aa1.33□□□□□ -2.2
CCDC171-207ENST00000478913 MT1EP04732 61 aa1.32□□□□□ -2.2
CCDC171-207ENST00000478913 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
CCDC171-207ENST00000478913 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CCDC171-207ENST00000478913 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
CCDC171-207ENST00000478913 KRTAP19-5Q3LI72 72 aa1.13□□□□□ -2.23
CCDC171-207ENST00000478913 MT1LQ93083 61 aa1.11□□□□□ -2.23
CCDC171-207ENST00000478913 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
CCDC171-207ENST00000478913 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
CCDC171-207ENST00000478913 MT1AP04731 61 aa0.98□□□□□ -2.25
CCDC171-207ENST00000478913 PRM1P04553 51 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 58.2 ms