RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 SMIM2Q9BVW6 85 aa2.5□□□□□ -2.01
LRCH3-215ENST00000476664 SPINK1P00995 79 aa2.49□□□□□ -2.01
LRCH3-215ENST00000476664 H0YGX0 51 aa2.48□□□□□ -2.01
LRCH3-215ENST00000476664 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
LRCH3-215ENST00000476664 LINC00308Q8TCZ7 52 aa2.47□□□□□ -2.01
LRCH3-215ENST00000476664 KCNQ1DNQ9H478 68 aa2.45□□□□□ -2.02
LRCH3-215ENST00000476664 ETDCA0A1B0GVM5 59 aa2.43□□□□□ -2.02
LRCH3-215ENST00000476664 NDUFA1O15239 70 aa2.43□□□□□ -2.02
LRCH3-215ENST00000476664 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
LRCH3-215ENST00000476664 RPS29P62273 56 aaKnown RBP2.42□□□□□ -2.02
LRCH3-215ENST00000476664 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
LRCH3-215ENST00000476664 A0A1B0GU69 56 aa2.4□□□□□ -2.03
LRCH3-215ENST00000476664 POLR2KP53803 58 aaKnown RBP2.39□□□□□ -2.03
LRCH3-215ENST00000476664 RPL39LQ96EH5 51 aaKnown RBP2.39□□□□□ -2.03
LRCH3-215ENST00000476664 RPL39P62891 51 aaKnown RBP2.38□□□□□ -2.03
LRCH3-215ENST00000476664 SSBP3-AS1Q7Z2R9 100 aa2.38□□□□□ -2.03
LRCH3-215ENST00000476664 MT4P47944 62 aa2.37□□□□□ -2.03
LRCH3-215ENST00000476664 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
LRCH3-215ENST00000476664 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
LRCH3-215ENST00000476664 PRLHP81277 87 aa2.36□□□□□ -2.03
LRCH3-215ENST00000476664 MT1BP07438 61 aa2.35□□□□□ -2.03
LRCH3-215ENST00000476664 COX7BP24311 80 aa2.35□□□□□ -2.03
LRCH3-215ENST00000476664 LINC00158P58513 81 aa2.35□□□□□ -2.03
LRCH3-215ENST00000476664 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
LRCH3-215ENST00000476664 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
LRCH3-215ENST00000476664 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
LRCH3-215ENST00000476664 M0QY20 66 aa2.3□□□□□ -2.04
LRCH3-215ENST00000476664 Q8IZM0 81 aa2.29□□□□□ -2.04
LRCH3-215ENST00000476664 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
LRCH3-215ENST00000476664 A0A0D9SG42 100 aa2.24□□□□□ -2.05
LRCH3-215ENST00000476664 K7EQZ3 153 aa2.24□□□□□ -2.05
LRCH3-215ENST00000476664 TP53AIP1Q9HCN2 124 aa2.24□□□□□ -2.05
LRCH3-215ENST00000476664 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
LRCH3-215ENST00000476664 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
LRCH3-215ENST00000476664 IGLV5-48A0A075B6I7 105 aa2.19□□□□□ -2.06
LRCH3-215ENST00000476664 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
LRCH3-215ENST00000476664 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
LRCH3-215ENST00000476664 WFDC13Q8IUB5 93 aa2.17□□□□□ -2.06
LRCH3-215ENST00000476664 H0YAA0 97 aa2.15□□□□□ -2.07
LRCH3-215ENST00000476664 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
LRCH3-215ENST00000476664 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
LRCH3-215ENST00000476664 MMP24-AS1A0A0U1RRL7 71 aa2.1□□□□□ -2.07
LRCH3-215ENST00000476664 DEFB105AQ8NG35 78 aa2.09□□□□□ -2.07
LRCH3-215ENST00000476664 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
LRCH3-215ENST00000476664 SPRR1AP35321 89 aa2.05□□□□□ -2.08
LRCH3-215ENST00000476664 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
LRCH3-215ENST00000476664 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
LRCH3-215ENST00000476664 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
LRCH3-215ENST00000476664 MRPL34Q9BQ48 92 aaKnown RBP2.04□□□□□ -2.08
LRCH3-215ENST00000476664 MT1XP80297 61 aa2.03□□□□□ -2.08
LRCH3-215ENST00000476664 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
LRCH3-215ENST00000476664 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
LRCH3-215ENST00000476664 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
LRCH3-215ENST00000476664 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
LRCH3-215ENST00000476664 SPRR1BP22528 89 aa1.95□□□□□ -2.1
LRCH3-215ENST00000476664 KRTAP19-3Q7Z4W3 81 aa1.95□□□□□ -2.1
LRCH3-215ENST00000476664 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
LRCH3-215ENST00000476664 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
LRCH3-215ENST00000476664 S4R3F8 94 aa1.85□□□□□ -2.11
LRCH3-215ENST00000476664 MT1EP04732 61 aa1.84□□□□□ -2.11
LRCH3-215ENST00000476664 MT1GP13640 62 aa1.83□□□□□ -2.12
LRCH3-215ENST00000476664 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
LRCH3-215ENST00000476664 KRTAP4-3Q9BYR4 195 aa1.81□□□□□ -2.12
LRCH3-215ENST00000476664 MT1MQ8N339 61 aa1.8□□□□□ -2.12
LRCH3-215ENST00000476664 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
LRCH3-215ENST00000476664 M0QZ58 72 aa1.65□□□□□ -2.15
LRCH3-215ENST00000476664 MT1LQ93083 61 aa1.64□□□□□ -2.15
LRCH3-215ENST00000476664 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
LRCH3-215ENST00000476664 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
LRCH3-215ENST00000476664 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
LRCH3-215ENST00000476664 TNP1P09430 55 aa1.48□□□□□ -2.17
LRCH3-215ENST00000476664 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
LRCH3-215ENST00000476664 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
LRCH3-215ENST00000476664 MT1AP04731 61 aa1.38□□□□□ -2.19
LRCH3-215ENST00000476664 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
LRCH3-215ENST00000476664 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
LRCH3-215ENST00000476664 PRM1P04553 51 aa1.18□□□□□ -2.22
LRCH3-215ENST00000476664 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms