RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
SHROOM3-204ENST00000473602 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
SHROOM3-204ENST00000473602 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
SHROOM3-204ENST00000473602 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
SHROOM3-204ENST00000473602 SPRR2DP22532 72 aa5.32□□□□□ -1.56
SHROOM3-204ENST00000473602 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
SHROOM3-204ENST00000473602 K7ERS5 55 aa5.22□□□□□ -1.57
SHROOM3-204ENST00000473602 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
SHROOM3-204ENST00000473602 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
SHROOM3-204ENST00000473602 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
SHROOM3-204ENST00000473602 A0A1B0GU33 70 aa5.17□□□□□ -1.58
SHROOM3-204ENST00000473602 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
SHROOM3-204ENST00000473602 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
SHROOM3-204ENST00000473602 A8MU10 97 aa5.14□□□□□ -1.59
SHROOM3-204ENST00000473602 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
SHROOM3-204ENST00000473602 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
SHROOM3-204ENST00000473602 A0A0D9SG42 100 aa5.05□□□□□ -1.6
SHROOM3-204ENST00000473602 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
SHROOM3-204ENST00000473602 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
SHROOM3-204ENST00000473602 ROMO1P60602 79 aa4.88□□□□□ -1.63
SHROOM3-204ENST00000473602 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
SHROOM3-204ENST00000473602 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
SHROOM3-204ENST00000473602 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
SHROOM3-204ENST00000473602 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
SHROOM3-204ENST00000473602 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SHROOM3-204ENST00000473602 MT1EP04732 61 aa4.81□□□□□ -1.64
SHROOM3-204ENST00000473602 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
SHROOM3-204ENST00000473602 TNP1P09430 55 aa4.75□□□□□ -1.65
SHROOM3-204ENST00000473602 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
SHROOM3-204ENST00000473602 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
SHROOM3-204ENST00000473602 MT4P47944 62 aa4.71□□□□□ -1.66
SHROOM3-204ENST00000473602 MT1GP13640 62 aa4.68□□□□□ -1.66
SHROOM3-204ENST00000473602 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
SHROOM3-204ENST00000473602 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
SHROOM3-204ENST00000473602 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
SHROOM3-204ENST00000473602 MT1LQ93083 61 aa4.61□□□□□ -1.67
SHROOM3-204ENST00000473602 MT1MQ8N339 61 aa4.58□□□□□ -1.68
SHROOM3-204ENST00000473602 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
SHROOM3-204ENST00000473602 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SHROOM3-204ENST00000473602 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SHROOM3-204ENST00000473602 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SHROOM3-204ENST00000473602 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
SHROOM3-204ENST00000473602 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SHROOM3-204ENST00000473602 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SHROOM3-204ENST00000473602 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
SHROOM3-204ENST00000473602 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
SHROOM3-204ENST00000473602 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
SHROOM3-204ENST00000473602 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
SHROOM3-204ENST00000473602 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
SHROOM3-204ENST00000473602 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
SHROOM3-204ENST00000473602 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
SHROOM3-204ENST00000473602 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
SHROOM3-204ENST00000473602 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
SHROOM3-204ENST00000473602 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
SHROOM3-204ENST00000473602 A0A0A0MQY5 61 aa4□□□□□ -1.77
SHROOM3-204ENST00000473602 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SHROOM3-204ENST00000473602 MT3P25713 68 aa3.95□□□□□ -1.78
SHROOM3-204ENST00000473602 MT1AP04731 61 aa3.94□□□□□ -1.78
SHROOM3-204ENST00000473602 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
SHROOM3-204ENST00000473602 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
SHROOM3-204ENST00000473602 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
SHROOM3-204ENST00000473602 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SHROOM3-204ENST00000473602 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
SHROOM3-204ENST00000473602 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
SHROOM3-204ENST00000473602 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SHROOM3-204ENST00000473602 INE1O15225 51 aa3.68□□□□□ -1.82
SHROOM3-204ENST00000473602 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
SHROOM3-204ENST00000473602 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SHROOM3-204ENST00000473602 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
SHROOM3-204ENST00000473602 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
SHROOM3-204ENST00000473602 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
SHROOM3-204ENST00000473602 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SHROOM3-204ENST00000473602 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SHROOM3-204ENST00000473602 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SHROOM3-204ENST00000473602 PRM1P04553 51 aa2.47□□□□□ -2.01
SHROOM3-204ENST00000473602 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SHROOM3-204ENST00000473602 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SHROOM3-204ENST00000473602 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 86.6 ms