RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 MRPL34Q9BQ48 92 aaKnown RBP2.22□□□□□ -2.05
LMNB1-205ENST00000472034 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
LMNB1-205ENST00000472034 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
LMNB1-205ENST00000472034 H0YAA0 97 aa2.2□□□□□ -2.06
LMNB1-205ENST00000472034 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
LMNB1-205ENST00000472034 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
LMNB1-205ENST00000472034 SPRR2EP22531 72 aa2.18□□□□□ -2.06
LMNB1-205ENST00000472034 SPRR1AP35321 89 aa2.18□□□□□ -2.06
LMNB1-205ENST00000472034 SPRR2BP35325 72 aa2.18□□□□□ -2.06
LMNB1-205ENST00000472034 SPRR2AP35326 72 aa2.18□□□□□ -2.06
LMNB1-205ENST00000472034 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
LMNB1-205ENST00000472034 C9orf92A6NGG3 77 aa2.16□□□□□ -2.06
LMNB1-205ENST00000472034 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
LMNB1-205ENST00000472034 SPRR1BP22528 89 aa2.14□□□□□ -2.07
LMNB1-205ENST00000472034 IGFL1Q6UW32 110 aa2.14□□□□□ -2.07
LMNB1-205ENST00000472034 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
LMNB1-205ENST00000472034 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
LMNB1-205ENST00000472034 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
LMNB1-205ENST00000472034 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
LMNB1-205ENST00000472034 SPRR2DP22532 72 aa2.1□□□□□ -2.07
LMNB1-205ENST00000472034 UNQ6190/PRO20217Q6UXQ8 127 aa2.1□□□□□ -2.07
LMNB1-205ENST00000472034 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
LMNB1-205ENST00000472034 SPINK1P00995 79 aa2.09□□□□□ -2.07
LMNB1-205ENST00000472034 PRLHP81277 87 aa2.09□□□□□ -2.07
LMNB1-205ENST00000472034 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
LMNB1-205ENST00000472034 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
LMNB1-205ENST00000472034 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
LMNB1-205ENST00000472034 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
LMNB1-205ENST00000472034 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
LMNB1-205ENST00000472034 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
LMNB1-205ENST00000472034 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
LMNB1-205ENST00000472034 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
LMNB1-205ENST00000472034 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
LMNB1-205ENST00000472034 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
LMNB1-205ENST00000472034 MT1BP07438 61 aa1.98□□□□□ -2.09
LMNB1-205ENST00000472034 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
LMNB1-205ENST00000472034 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-205ENST00000472034 S4R3F8 94 aa1.94□□□□□ -2.1
LMNB1-205ENST00000472034 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
LMNB1-205ENST00000472034 MT4P47944 62 aa1.92□□□□□ -2.1
LMNB1-205ENST00000472034 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
LMNB1-205ENST00000472034 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
LMNB1-205ENST00000472034 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
LMNB1-205ENST00000472034 KRTAP19-8Q3LI54 63 aa1.86□□□□□ -2.11
LMNB1-205ENST00000472034 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
LMNB1-205ENST00000472034 M0QZ58 72 aa1.84□□□□□ -2.11
LMNB1-205ENST00000472034 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
LMNB1-205ENST00000472034 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.12
LMNB1-205ENST00000472034 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
LMNB1-205ENST00000472034 A0A0D9SG42 100 aa1.74□□□□□ -2.13
LMNB1-205ENST00000472034 MT1XP80297 61 aa1.74□□□□□ -2.13
LMNB1-205ENST00000472034 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
LMNB1-205ENST00000472034 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
LMNB1-205ENST00000472034 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
LMNB1-205ENST00000472034 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
LMNB1-205ENST00000472034 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
LMNB1-205ENST00000472034 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
LMNB1-205ENST00000472034 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
LMNB1-205ENST00000472034 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
LMNB1-205ENST00000472034 TNP1P09430 55 aa1.62□□□□□ -2.15
LMNB1-205ENST00000472034 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
LMNB1-205ENST00000472034 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
LMNB1-205ENST00000472034 MT1EP04732 61 aa1.56□□□□□ -2.16
LMNB1-205ENST00000472034 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
LMNB1-205ENST00000472034 MT1MQ8N339 61 aa1.52□□□□□ -2.17
LMNB1-205ENST00000472034 MT1GP13640 62 aa1.5□□□□□ -2.17
LMNB1-205ENST00000472034 MT1LQ93083 61 aa1.41□□□□□ -2.18
LMNB1-205ENST00000472034 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
LMNB1-205ENST00000472034 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
LMNB1-205ENST00000472034 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
LMNB1-205ENST00000472034 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
LMNB1-205ENST00000472034 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
LMNB1-205ENST00000472034 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
LMNB1-205ENST00000472034 MT1AP04731 61 aa1.19□□□□□ -2.22
LMNB1-205ENST00000472034 PRM1P04553 51 aa1.16□□□□□ -2.22
LMNB1-205ENST00000472034 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
LMNB1-205ENST00000472034 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
LMNB1-205ENST00000472034 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms