RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 KRTAP20-1Q3LI63 56 aa0.99□□□□□ -2.25
CD46-213ENST00000471987 M0QZ58 72 aa0.98□□□□□ -2.25
CD46-213ENST00000471987 H3BUX3 64 aa0.97□□□□□ -2.25
CD46-213ENST00000471987 SMR3AQ99954 134 aa0.97□□□□□ -2.25
CD46-213ENST00000471987 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
CD46-213ENST00000471987 APELAP0DMC3 54 aa0.96□□□□□ -2.26
CD46-213ENST00000471987 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
CD46-213ENST00000471987 HRNRQ86YZ3 2850 aaPredicted RBP0.94□□□□□ -2.26
CD46-213ENST00000471987 H0YGG7 62 aa0.94□□□□□ -2.26
CD46-213ENST00000471987 STATHP02808 62 aa0.94□□□□□ -2.26
CD46-213ENST00000471987 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
CD46-213ENST00000471987 DEFB124Q8NES8 71 aa0.93□□□□□ -2.26
CD46-213ENST00000471987 COX14Q96I36 57 aa0.93□□□□□ -2.26
CD46-213ENST00000471987 LPAP08519 4548 aa0.92□□□□□ -2.26
CD46-213ENST00000471987 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
CD46-213ENST00000471987 KRTAP10-4P60372 401 aaPredicted RBP0.92□□□□□ -2.26
CD46-213ENST00000471987 RHPN1-AS1Q9BWJ2 59 aa0.92□□□□□ -2.26
CD46-213ENST00000471987 DEFB1P60022 68 aa0.91□□□□□ -2.26
CD46-213ENST00000471987 DEFB135Q30KP9 77 aa0.9□□□□□ -2.27
CD46-213ENST00000471987 TNP1P09430 55 aa0.88□□□□□ -2.27
CD46-213ENST00000471987 HTN1P15515 57 aa0.88□□□□□ -2.27
CD46-213ENST00000471987 DSTQ03001 7570 aaKnown RBP0.86□□□□□ -2.27
CD46-213ENST00000471987 C9orf92A6NGG3 77 aa0.86□□□□□ -2.27
CD46-213ENST00000471987 M0R2T5 61 aa0.86□□□□□ -2.27
CD46-213ENST00000471987 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
CD46-213ENST00000471987 FLGP20930 4061 aaPredicted RBP0.85□□□□□ -2.27
CD46-213ENST00000471987 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 SPART-AS1P0CW21 52 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 DEFB136Q30KP8 78 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 KRTAP2-1Q9BYU5 128 aa0.84□□□□□ -2.27
CD46-213ENST00000471987 A0A096LNI7 61 aa0.82□□□□□ -2.28
CD46-213ENST00000471987 DEFB108BQ8NET1 73 aa0.82□□□□□ -2.28
CD46-213ENST00000471987 DEFB110Q30KQ9 67 aa0.81□□□□□ -2.28
CD46-213ENST00000471987 Q9Y3F1 56 aa0.8□□□□□ -2.28
CD46-213ENST00000471987 H3BNG1 76 aa0.77□□□□□ -2.29
CD46-213ENST00000471987 LINC01556Q5JQF7 62 aa0.76□□□□□ -2.29
CD46-213ENST00000471987 KRTAP8-1Q8IUC2 63 aa0.75□□□□□ -2.29
CD46-213ENST00000471987 A0A096LPF7 62 aa0.74□□□□□ -2.29
CD46-213ENST00000471987 RPS29P62273 56 aaKnown RBP0.74□□□□□ -2.29
CD46-213ENST00000471987 U3KQA8 63 aa0.74□□□□□ -2.29
CD46-213ENST00000471987 PRM1P04553 51 aa0.73□□□□□ -2.29
CD46-213ENST00000471987 DEFB133Q30KQ1 61 aa0.72□□□□□ -2.29
CD46-213ENST00000471987 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
CD46-213ENST00000471987 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.3
CD46-213ENST00000471987 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
CD46-213ENST00000471987 CD52P31358 61 aa0.64□□□□□ -2.31
CD46-213ENST00000471987 MT1AP04731 61 aa0.63□□□□□ -2.31
CD46-213ENST00000471987 SPRR2DP22532 72 aa0.63□□□□□ -2.31
CD46-213ENST00000471987 KRTAP19-6Q3LI70 58 aa0.63□□□□□ -2.31
CD46-213ENST00000471987 SPRR2BP35325 72 aa0.62□□□□□ -2.31
CD46-213ENST00000471987 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
CD46-213ENST00000471987 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
CD46-213ENST00000471987 HTN3P15516 51 aa0.6□□□□□ -2.31
CD46-213ENST00000471987 SPRR2AP35326 72 aa0.59□□□□□ -2.31
CD46-213ENST00000471987 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CD46-213ENST00000471987 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
CD46-213ENST00000471987 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
CD46-213ENST00000471987 SPRR2EP22531 72 aa0.55□□□□□ -2.32
CD46-213ENST00000471987 KRTAP19-2Q3LHN2 52 aa0.55□□□□□ -2.32
CD46-213ENST00000471987 DEFB4AO15263 64 aa0.53□□□□□ -2.32
CD46-213ENST00000471987 MT1HP80294 61 aa0.53□□□□□ -2.32
CD46-213ENST00000471987 MT4P47944 62 aa0.52□□□□□ -2.33
CD46-213ENST00000471987 MT1EP04732 61 aa0.49□□□□□ -2.33
CD46-213ENST00000471987 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
CD46-213ENST00000471987 MT1LQ93083 61 aa0.46□□□□□ -2.34
CD46-213ENST00000471987 SPRR2GQ9BYE4 73 aa0.46□□□□□ -2.34
CD46-213ENST00000471987 KRTAP20-2Q3LI61 65 aa0.43□□□□□ -2.34
CD46-213ENST00000471987 MT1FP04733 61 aa0.39□□□□□ -2.35
CD46-213ENST00000471987 MT2AP02795 61 aa0.38□□□□□ -2.35
CD46-213ENST00000471987 MT1XP80297 61 aa0.38□□□□□ -2.35
CD46-213ENST00000471987 KRTAP19-8Q3LI54 63 aa0.37□□□□□ -2.35
CD46-213ENST00000471987 KRTAP19-7Q3SYF9 63 aa0.33□□□□□ -2.36
CD46-213ENST00000471987 MT1GP13640 62 aa0.31□□□□□ -2.36
CD46-213ENST00000471987 MT1MQ8N339 61 aa0.29□□□□□ -2.36
CD46-213ENST00000471987 MT1BP07438 61 aa0.28□□□□□ -2.36
CD46-213ENST00000471987 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 126.8 ms