RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
MRPL40-203ENST00000471259 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
MRPL40-203ENST00000471259 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
MRPL40-203ENST00000471259 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
MRPL40-203ENST00000471259 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
MRPL40-203ENST00000471259 SPRR2DP22532 72 aa4.81□□□□□ -1.64
MRPL40-203ENST00000471259 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
MRPL40-203ENST00000471259 P0C880 135 aa4.79□□□□□ -1.64
MRPL40-203ENST00000471259 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
MRPL40-203ENST00000471259 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
MRPL40-203ENST00000471259 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
MRPL40-203ENST00000471259 MT1XP80297 61 aa4.71□□□□□ -1.66
MRPL40-203ENST00000471259 R4GN34 69 aa4.64□□□□□ -1.67
MRPL40-203ENST00000471259 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
MRPL40-203ENST00000471259 M0QZ58 72 aa4.59□□□□□ -1.67
MRPL40-203ENST00000471259 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
MRPL40-203ENST00000471259 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
MRPL40-203ENST00000471259 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
MRPL40-203ENST00000471259 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
MRPL40-203ENST00000471259 A0A0D9SG42 100 aa4.5□□□□□ -1.69
MRPL40-203ENST00000471259 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
MRPL40-203ENST00000471259 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
MRPL40-203ENST00000471259 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
MRPL40-203ENST00000471259 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
MRPL40-203ENST00000471259 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
MRPL40-203ENST00000471259 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
MRPL40-203ENST00000471259 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
MRPL40-203ENST00000471259 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
MRPL40-203ENST00000471259 MT3P25713 68 aa4.27□□□□□ -1.73
MRPL40-203ENST00000471259 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
MRPL40-203ENST00000471259 MT1EP04732 61 aa4.21□□□□□ -1.74
MRPL40-203ENST00000471259 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
MRPL40-203ENST00000471259 MT4P47944 62 aa4.19□□□□□ -1.74
MRPL40-203ENST00000471259 MT1GP13640 62 aa4.18□□□□□ -1.74
MRPL40-203ENST00000471259 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
MRPL40-203ENST00000471259 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
MRPL40-203ENST00000471259 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
MRPL40-203ENST00000471259 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
MRPL40-203ENST00000471259 TNP1P09430 55 aa4.06□□□□□ -1.76
MRPL40-203ENST00000471259 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
MRPL40-203ENST00000471259 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
MRPL40-203ENST00000471259 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
MRPL40-203ENST00000471259 MT1MQ8N339 61 aa4.03□□□□□ -1.76
MRPL40-203ENST00000471259 INE1O15225 51 aa4.02□□□□□ -1.77
MRPL40-203ENST00000471259 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
MRPL40-203ENST00000471259 MT1LQ93083 61 aa3.97□□□□□ -1.77
MRPL40-203ENST00000471259 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
MRPL40-203ENST00000471259 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
MRPL40-203ENST00000471259 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
MRPL40-203ENST00000471259 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
MRPL40-203ENST00000471259 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
MRPL40-203ENST00000471259 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
MRPL40-203ENST00000471259 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
MRPL40-203ENST00000471259 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
MRPL40-203ENST00000471259 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
MRPL40-203ENST00000471259 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
MRPL40-203ENST00000471259 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
MRPL40-203ENST00000471259 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
MRPL40-203ENST00000471259 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
MRPL40-203ENST00000471259 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
MRPL40-203ENST00000471259 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
MRPL40-203ENST00000471259 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
MRPL40-203ENST00000471259 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
MRPL40-203ENST00000471259 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
MRPL40-203ENST00000471259 MT1AP04731 61 aa3.4□□□□□ -1.87
MRPL40-203ENST00000471259 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
MRPL40-203ENST00000471259 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
MRPL40-203ENST00000471259 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
MRPL40-203ENST00000471259 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
MRPL40-203ENST00000471259 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
MRPL40-203ENST00000471259 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
MRPL40-203ENST00000471259 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
MRPL40-203ENST00000471259 PRM1P04553 51 aa2.53□□□□□ -2
MRPL40-203ENST00000471259 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
MRPL40-203ENST00000471259 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
MRPL40-203ENST00000471259 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
MRPL40-203ENST00000471259 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
MRPL40-203ENST00000471259 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 116 ms