RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PLNP26678 52 aa-0.66□□□□□ -2.52
UBXN4-207ENST00000471246 NAP1L6A6NFF2 107 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 UMAD1C9J7I0 102 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 UQCR11O14957 56 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 S100A6P06703 90 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 SMIM20Q8N5G0 67 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 SMIM4Q8WVI0 70 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 S100A16Q96FQ6 103 aaKnown RBP-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 UBL5Q9BZL1 73 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 V9GYH0 126 aa-0.67□□□□□ -2.52
UBXN4-207ENST00000471246 A0A1B0GV72 72 aa-0.68□□□□□ -2.52
UBXN4-207ENST00000471246 SMIM6P0DI80 62 aa-0.68□□□□□ -2.52
UBXN4-207ENST00000471246 KRTDAPP60985 99 aa-0.68□□□□□ -2.52
UBXN4-207ENST00000471246 MT-ND4LP03901 98 aa-0.69□□□□□ -2.52
UBXN4-207ENST00000471246 LSM3P62310 102 aaKnown RBP-0.69□□□□□ -2.52
UBXN4-207ENST00000471246 GNG4P50150 75 aa-0.7□□□□□ -2.52
UBXN4-207ENST00000471246 PFDN1O60925 122 aa-0.71□□□□□ -2.52
UBXN4-207ENST00000471246 APOC3P02656 99 aa-0.71□□□□□ -2.52
UBXN4-207ENST00000471246 TRIQKQ629K1 86 aa-0.71□□□□□ -2.52
UBXN4-207ENST00000471246 CTXND1A0A1B0GTU2 59 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 MAP1LC3B2A6NCE7 125 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 EFCAB10A6NFE3 127 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 DPM2O94777 84 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 NDUFB6O95139 128 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 COX6CP09669 75 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 PEA15Q15121 130 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 LINC01545Q5VT33 79 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 C12orf73Q69YU5 71 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 BRK1Q8WUW1 75 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 IFI27L1Q96BM0 104 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 SMCO4Q9NRQ5 59 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 CCDC167Q9P0B6 97 aa-0.72□□□□□ -2.52
UBXN4-207ENST00000471246 SMIM31A0A1B0GVY4 71 aa-0.73□□□□□ -2.53
UBXN4-207ENST00000471246 GNGT1P63211 74 aa-0.73□□□□□ -2.53
UBXN4-207ENST00000471246 HSD52Q0P140 79 aa-0.73□□□□□ -2.53
UBXN4-207ENST00000471246 GNGT2O14610 69 aa-0.74□□□□□ -2.53
UBXN4-207ENST00000471246 DR1Q01658 176 aa-0.74□□□□□ -2.53
UBXN4-207ENST00000471246 HOPXQ9BPY8 73 aaPredicted RBP-0.74□□□□□ -2.53
UBXN4-207ENST00000471246 VAMP8Q9BV40 100 aa-0.75□□□□□ -2.53
UBXN4-207ENST00000471246 MANBALQ9NQG1 85 aa-0.75□□□□□ -2.53
UBXN4-207ENST00000471246 LINC01558Q9Y6Z2 57 aa-0.75□□□□□ -2.53
UBXN4-207ENST00000471246 AKAIN1P0CW23 69 aa-0.76□□□□□ -2.53
UBXN4-207ENST00000471246 ATXN8Q156A1 80 aa-0.76□□□□□ -2.53
UBXN4-207ENST00000471246 PRO1854Q9UHT4 67 aa-0.76□□□□□ -2.53
UBXN4-207ENST00000471246 S100A1P23297 94 aa-0.77□□□□□ -2.53
UBXN4-207ENST00000471246 FAUP35544 74 aaKnown RBP-0.77□□□□□ -2.53
UBXN4-207ENST00000471246 PMCHL2Q9BQD1 86 aa-0.77□□□□□ -2.53
UBXN4-207ENST00000471246 DEFB107AQ8IZN7 70 aa-0.78□□□□□ -2.53
UBXN4-207ENST00000471246 SMIM3Q9BZL3 60 aa-0.78□□□□□ -2.53
UBXN4-207ENST00000471246 GNG13Q9P2W3 67 aa-0.78□□□□□ -2.53
UBXN4-207ENST00000471246 CCDC179H3BU77 68 aa-0.79□□□□□ -2.54
UBXN4-207ENST00000471246 PMCHL1Q16048 86 aa-0.79□□□□□ -2.54
UBXN4-207ENST00000471246 ATP5EP2Q5VTU8 51 aa-0.79□□□□□ -2.54
UBXN4-207ENST00000471246 C18orf32Q8TCD1 76 aa-0.8□□□□□ -2.54
UBXN4-207ENST00000471246 UQCR10Q9UDW1 63 aa-0.8□□□□□ -2.54
UBXN4-207ENST00000471246 FAM25AB3EWG3 89 aa-0.81□□□□□ -2.54
UBXN4-207ENST00000471246 FAM25CB3EWG5 89 aa-0.81□□□□□ -2.54
UBXN4-207ENST00000471246 FAM25GB3EWG6 89 aa-0.81□□□□□ -2.54
UBXN4-207ENST00000471246 ADIRFQ15847 76 aa-0.81□□□□□ -2.54
UBXN4-207ENST00000471246 TOMM5Q8N4H5 51 aa-0.81□□□□□ -2.54
UBXN4-207ENST00000471246 ETDBQ3ZM63 59 aa-0.83□□□□□ -2.54
UBXN4-207ENST00000471246 DLEU1O43261 78 aa-0.84□□□□□ -2.54
UBXN4-207ENST00000471246 C8orf59Q8N0T1 100 aaPredicted RBP-0.84□□□□□ -2.54
UBXN4-207ENST00000471246 LINC00643Q86TS7 51 aa-0.85□□□□□ -2.55
UBXN4-207ENST00000471246 Q9H521 79 aa-0.85□□□□□ -2.55
UBXN4-207ENST00000471246 KANTRA0A1W2PQU2 76 aa-0.86□□□□□ -2.55
UBXN4-207ENST00000471246 ATP5EP56381 51 aaPredicted RBP-0.89□□□□□ -2.55
UBXN4-207ENST00000471246 GNG11P61952 73 aa-0.89□□□□□ -2.55
UBXN4-207ENST00000471246 C14orf144Q96I85 54 aa-0.9□□□□□ -2.55
UBXN4-207ENST00000471246 COL5A1-AS1Q5SY13 56 aa-0.91□□□□□ -2.56
UBXN4-207ENST00000471246 PYY3Q5JQD4 70 aa-0.92□□□□□ -2.56
UBXN4-207ENST00000471246 M0R143 59 aa-0.94□□□□□ -2.56
UBXN4-207ENST00000471246 SVBPQ8N300 66 aa-0.97□□□□□ -2.56
UBXN4-207ENST00000471246 GTF2H5Q6ZYL4 71 aa-0.98□□□□□ -2.57
UBXN4-207ENST00000471246 J3QR89 54 aa-0.99□□□□□ -2.57
UBXN4-207ENST00000471246 K7ERU9 68 aa-1.03□□□□□ -2.57
UBXN4-207ENST00000471246 A0A1B0GV90 55 aa-1.15□□□□□ -2.59
UBXN4-207ENST00000471246 LOC105371267A0A1B0GV96 52 aa-1.29□□□□□ -2.62
Retrieved 78 of 20,778 RNA–protein pairs in 84.8 ms