RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 MAP1AP78559 2803 aaPredicted RBP0.5□□□□□ -2.33
TTC3-213ENST00000469939 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
TTC3-213ENST00000469939 SACSQ9NZJ4 4579 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 VPS13CQ709C8 3753 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
TTC3-213ENST00000469939 MT1AP04731 61 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 ATMQ13315 3056 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 CMYA5Q8N3K9 4069 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 TRRAPQ9Y4A5 3859 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 LAMA5O15230 3695 aa0.49□□□□□ -2.33
TTC3-213ENST00000469939 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
TTC3-213ENST00000469939 DMXL2Q8TDJ6 3036 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 LRBAP50851 2863 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 MYCBP2O75592 4640 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 CENPEQ02224 2701 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
TTC3-213ENST00000469939 SPRR2BP35325 72 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 ADGRG4Q8IZF6 3080 aa0.48□□□□□ -2.33
TTC3-213ENST00000469939 PKHD1L1Q86WI1 4243 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 ITPR2Q14571 2701 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 ANK3Q12955 4377 aaKnown RBP0.47□□□□□ -2.33
TTC3-213ENST00000469939 DNAH1Q9P2D7 4330 aa0.47□□□□□ -2.33
TTC3-213ENST00000469939 NIPBLQ6KC79 2804 aaeCLIP0.46□□□□□ -2.34
TTC3-213ENST00000469939 LAMA1P25391 3075 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 DEFB4AO15263 64 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 SPRR2DP22532 72 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 SPRR2AP35326 72 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 DNAH6Q9C0G6 4158 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
TTC3-213ENST00000469939 PKHD1P08F94 4074 aa0.45□□□□□ -2.34
TTC3-213ENST00000469939 HSPG2P98160 4391 aa0.45□□□□□ -2.34
TTC3-213ENST00000469939 DNAH2Q9P225 4427 aa0.44□□□□□ -2.34
TTC3-213ENST00000469939 LRP1BQ9NZR2 4599 aa0.44□□□□□ -2.34
TTC3-213ENST00000469939 PKD1P98161 4303 aa0.44□□□□□ -2.34
TTC3-213ENST00000469939 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
TTC3-213ENST00000469939 MUC12Q9UKN1 5478 aa0.44□□□□□ -2.34
TTC3-213ENST00000469939 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
TTC3-213ENST00000469939 TACC2O95359 2948 aa0.42□□□□□ -2.34
TTC3-213ENST00000469939 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
TTC3-213ENST00000469939 HRNRQ86YZ3 2850 aaPredicted RBP0.42□□□□□ -2.34
TTC3-213ENST00000469939 MT1EP04732 61 aa0.42□□□□□ -2.34
TTC3-213ENST00000469939 SPRR2GQ9BYE4 73 aa0.42□□□□□ -2.34
TTC3-213ENST00000469939 USH2AO75445 5202 aa0.42□□□□□ -2.34
TTC3-213ENST00000469939 SPRR2EP22531 72 aa0.41□□□□□ -2.34
TTC3-213ENST00000469939 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
TTC3-213ENST00000469939 MT1HP80294 61 aa0.39□□□□□ -2.35
TTC3-213ENST00000469939 MT1LQ93083 61 aa0.39□□□□□ -2.35
TTC3-213ENST00000469939 DNAH9Q9NYC9 4486 aa0.39□□□□□ -2.35
TTC3-213ENST00000469939 FAT1Q14517 4588 aa0.38□□□□□ -2.35
TTC3-213ENST00000469939 DNAH17Q9UFH2 4485 aa0.38□□□□□ -2.35
TTC3-213ENST00000469939 PLECQ15149 4684 aaKnown RBP0.38□□□□□ -2.35
TTC3-213ENST00000469939 LRP2P98164 4655 aa0.37□□□□□ -2.35
TTC3-213ENST00000469939 DNAH5Q8TE73 4624 aa0.37□□□□□ -2.35
TTC3-213ENST00000469939 DYNC1H1Q14204 4646 aaKnown RBP0.36□□□□□ -2.35
TTC3-213ENST00000469939 KRTAP19-8Q3LI54 63 aa0.36□□□□□ -2.35
TTC3-213ENST00000469939 LPAP08519 4548 aa0.36□□□□□ -2.35
TTC3-213ENST00000469939 STARD9Q9P2P6 4700 aa0.35□□□□□ -2.35
TTC3-213ENST00000469939 APOBP04114 4563 aaKnown RBP0.35□□□□□ -2.35
TTC3-213ENST00000469939 MT1XP80297 61 aa0.33□□□□□ -2.36
TTC3-213ENST00000469939 MUC17Q685J3 4493 aa0.31□□□□□ -2.36
TTC3-213ENST00000469939 KRTAP19-2Q3LHN2 52 aa0.31□□□□□ -2.36
TTC3-213ENST00000469939 KRTAP19-6Q3LI70 58 aa0.31□□□□□ -2.36
TTC3-213ENST00000469939 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
TTC3-213ENST00000469939 MT1BP07438 61 aa0.28□□□□□ -2.36
TTC3-213ENST00000469939 MT1MQ8N339 61 aa0.28□□□□□ -2.36
TTC3-213ENST00000469939 MT2AP02795 61 aa0.27□□□□□ -2.37
TTC3-213ENST00000469939 MT1GP13640 62 aa0.27□□□□□ -2.37
TTC3-213ENST00000469939 MT4P47944 62 aa0.27□□□□□ -2.37
TTC3-213ENST00000469939 MT1HL1P0DM35 61 aa0.24□□□□□ -2.37
TTC3-213ENST00000469939 KRTAP6-1Q3LI64 71 aa0.24□□□□□ -2.37
TTC3-213ENST00000469939 MT1FP04733 61 aa0.23□□□□□ -2.37
TTC3-213ENST00000469939 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms