RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
FAM49A-205ENST00000469507 IAPPP10997 89 aa0.87□□□□□ -2.27
FAM49A-205ENST00000469507 LINC00308Q8TCZ7 52 aa0.87□□□□□ -2.27
FAM49A-205ENST00000469507 C6orf48Q9UBA6 75 aa0.87□□□□□ -2.27
FAM49A-205ENST00000469507 SMIM27A0A1W2PRY6 76 aa0.86□□□□□ -2.27
FAM49A-205ENST00000469507 SPINK1P00995 79 aa0.86□□□□□ -2.27
FAM49A-205ENST00000469507 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
FAM49A-205ENST00000469507 HTN3P15516 51 aa0.85□□□□□ -2.27
FAM49A-205ENST00000469507 H0YAA0 97 aa0.84□□□□□ -2.27
FAM49A-205ENST00000469507 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
FAM49A-205ENST00000469507 DEFB130BP0DP73 79 aa0.83□□□□□ -2.28
FAM49A-205ENST00000469507 DEFB130AP0DP74 79 aa0.83□□□□□ -2.28
FAM49A-205ENST00000469507 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
FAM49A-205ENST00000469507 MT4P47944 62 aa0.8□□□□□ -2.28
FAM49A-205ENST00000469507 H3BUA1 57 aa0.79□□□□□ -2.28
FAM49A-205ENST00000469507 MT2AP02795 61 aa0.79□□□□□ -2.28
FAM49A-205ENST00000469507 PRLHP81277 87 aa0.79□□□□□ -2.28
FAM49A-205ENST00000469507 WFDC10BQ8IUB3 73 aa0.79□□□□□ -2.28
FAM49A-205ENST00000469507 LINC01546A6NGU7 62 aa0.78□□□□□ -2.28
FAM49A-205ENST00000469507 H3BNG1 76 aa0.78□□□□□ -2.28
FAM49A-205ENST00000469507 MT1FP04733 61 aa0.78□□□□□ -2.28
FAM49A-205ENST00000469507 SMIM2Q9BVW6 85 aa0.78□□□□□ -2.28
FAM49A-205ENST00000469507 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
FAM49A-205ENST00000469507 RPS27P42677 84 aaKnown RBP0.77□□□□□ -2.29
FAM49A-205ENST00000469507 WT1-ASQ06250 92 aa0.77□□□□□ -2.29
FAM49A-205ENST00000469507 RPS27LQ71UM5 84 aaKnown RBP0.77□□□□□ -2.29
FAM49A-205ENST00000469507 A0A096LPF7 62 aa0.74□□□□□ -2.29
FAM49A-205ENST00000469507 DEFB131AP59861 70 aa0.73□□□□□ -2.29
FAM49A-205ENST00000469507 LINC01556Q5JQF7 62 aa0.72□□□□□ -2.29
FAM49A-205ENST00000469507 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
FAM49A-205ENST00000469507 S4R3F8 94 aa0.72□□□□□ -2.29
FAM49A-205ENST00000469507 NDUFA1O15239 70 aa0.71□□□□□ -2.3
FAM49A-205ENST00000469507 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
FAM49A-205ENST00000469507 APELAP0DMC3 54 aa0.69□□□□□ -2.3
FAM49A-205ENST00000469507 LEAP2Q969E1 77 aa0.69□□□□□ -2.3
FAM49A-205ENST00000469507 RHPN1-AS1Q9BWJ2 59 aa0.69□□□□□ -2.3
FAM49A-205ENST00000469507 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
FAM49A-205ENST00000469507 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
FAM49A-205ENST00000469507 SNRPGP62308 76 aaKnown RBP0.66□□□□□ -2.3
FAM49A-205ENST00000469507 TMEM167AQ8TBQ9 72 aa0.65□□□□□ -2.31
FAM49A-205ENST00000469507 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
FAM49A-205ENST00000469507 IGLV5-48A0A075B6I7 105 aa0.62□□□□□ -2.31
FAM49A-205ENST00000469507 MMP24-AS1A0A0U1RRL7 71 aa0.62□□□□□ -2.31
FAM49A-205ENST00000469507 M0QY20 66 aa0.62□□□□□ -2.31
FAM49A-205ENST00000469507 HTN1P15515 57 aa0.62□□□□□ -2.31
FAM49A-205ENST00000469507 PRCDQ00LT1 54 aa0.62□□□□□ -2.31
FAM49A-205ENST00000469507 A0A096LNI7 61 aa0.61□□□□□ -2.31
FAM49A-205ENST00000469507 A8MTW9 85 aa0.61□□□□□ -2.31
FAM49A-205ENST00000469507 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
FAM49A-205ENST00000469507 MT1BP07438 61 aa0.61□□□□□ -2.31
FAM49A-205ENST00000469507 TTTY10Q9BZA0 68 aa0.61□□□□□ -2.31
FAM49A-205ENST00000469507 RPS29P62273 56 aaKnown RBP0.58□□□□□ -2.32
FAM49A-205ENST00000469507 KRTAP19-8Q3LI54 63 aa0.58□□□□□ -2.32
FAM49A-205ENST00000469507 RPL39P5Q59GN2 51 aa0.58□□□□□ -2.32
FAM49A-205ENST00000469507 PRM1P04553 51 aa0.57□□□□□ -2.32
FAM49A-205ENST00000469507 POLR2KP53803 58 aaKnown RBP0.57□□□□□ -2.32
FAM49A-205ENST00000469507 DEFB1P60022 68 aa0.57□□□□□ -2.32
FAM49A-205ENST00000469507 RPL39P62891 51 aaKnown RBP0.57□□□□□ -2.32
FAM49A-205ENST00000469507 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
FAM49A-205ENST00000469507 TOMM7Q9P0U1 55 aa0.56□□□□□ -2.32
FAM49A-205ENST00000469507 K7EIM0 57 aa0.55□□□□□ -2.32
FAM49A-205ENST00000469507 M0QZ58 72 aa0.53□□□□□ -2.32
FAM49A-205ENST00000469507 RPL39LQ96EH5 51 aaKnown RBP0.53□□□□□ -2.32
FAM49A-205ENST00000469507 TNP1P09430 55 aa0.52□□□□□ -2.33
FAM49A-205ENST00000469507 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
FAM49A-205ENST00000469507 MT1GP13640 62 aa0.51□□□□□ -2.33
FAM49A-205ENST00000469507 CLPSL2Q6UWE3 100 aa0.5□□□□□ -2.33
FAM49A-205ENST00000469507 MT1XP80297 61 aa0.48□□□□□ -2.33
FAM49A-205ENST00000469507 LINC01590Q5TEZ4 76 aa0.48□□□□□ -2.33
FAM49A-205ENST00000469507 ARHGAP5-AS1Q96IT6 56 aa0.48□□□□□ -2.33
FAM49A-205ENST00000469507 MT1MQ8N339 61 aa0.47□□□□□ -2.33
FAM49A-205ENST00000469507 MT1EP04732 61 aa0.46□□□□□ -2.34
FAM49A-205ENST00000469507 KRTAP19-7Q3SYF9 63 aa0.44□□□□□ -2.34
FAM49A-205ENST00000469507 KRTAP6-2Q3LI66 62 aa0.39□□□□□ -2.35
FAM49A-205ENST00000469507 MT1LQ93083 61 aa0.37□□□□□ -2.35
FAM49A-205ENST00000469507 MT1AP04731 61 aa0.33□□□□□ -2.36
FAM49A-205ENST00000469507 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
FAM49A-205ENST00000469507 KRTAP19-5Q3LI72 72 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 61.2 ms