RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
XRN1-207ENST00000468894 PRM1P04553 51 aa0.72□□□□□ -2.29
XRN1-207ENST00000468894 HRNRQ86YZ3 2850 aaPredicted RBP0.71□□□□□ -2.3
XRN1-207ENST00000468894 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
XRN1-207ENST00000468894 U3KQA8 63 aa0.7□□□□□ -2.3
XRN1-207ENST00000468894 PKHD1P08F94 4074 aa0.69□□□□□ -2.3
XRN1-207ENST00000468894 FAT3Q8TDW7 4589 aa0.69□□□□□ -2.3
XRN1-207ENST00000468894 APELAP0DMC3 54 aa0.69□□□□□ -2.3
XRN1-207ENST00000468894 DEFB1P60022 68 aa0.69□□□□□ -2.3
XRN1-207ENST00000468894 TNP1P09430 55 aa0.68□□□□□ -2.3
XRN1-207ENST00000468894 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
XRN1-207ENST00000468894 H3BNG1 76 aa0.67□□□□□ -2.3
XRN1-207ENST00000468894 TRRAPQ9Y4A5 3859 aa0.67□□□□□ -2.3
XRN1-207ENST00000468894 DNAH1Q9P2D7 4330 aa0.66□□□□□ -2.3
XRN1-207ENST00000468894 CMYA5Q8N3K9 4069 aa0.65□□□□□ -2.31
XRN1-207ENST00000468894 DNAH10Q8IVF4 4471 aa0.64□□□□□ -2.31
XRN1-207ENST00000468894 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
XRN1-207ENST00000468894 DNAH9Q9NYC9 4486 aa0.64□□□□□ -2.31
XRN1-207ENST00000468894 A0A096LNI7 61 aa0.63□□□□□ -2.31
XRN1-207ENST00000468894 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
XRN1-207ENST00000468894 LRP2P98164 4655 aa0.63□□□□□ -2.31
XRN1-207ENST00000468894 DEFB110Q30KQ9 67 aa0.63□□□□□ -2.31
XRN1-207ENST00000468894 STATHP02808 62 aa0.62□□□□□ -2.31
XRN1-207ENST00000468894 DEFB136Q30KP8 78 aa0.62□□□□□ -2.31
XRN1-207ENST00000468894 FAT1Q14517 4588 aa0.6□□□□□ -2.31
XRN1-207ENST00000468894 HTN1P15515 57 aa0.6□□□□□ -2.31
XRN1-207ENST00000468894 LRP1BQ9NZR2 4599 aa0.6□□□□□ -2.31
XRN1-207ENST00000468894 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.32
XRN1-207ENST00000468894 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
XRN1-207ENST00000468894 H3BUX3 64 aa0.58□□□□□ -2.32
XRN1-207ENST00000468894 LPAP08519 4548 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 DNAH5Q8TE73 4624 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 SPRR2DP22532 72 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 RHPN1-AS1Q9BWJ2 59 aa0.57□□□□□ -2.32
XRN1-207ENST00000468894 DYNC1H1Q14204 4646 aaKnown RBP0.56□□□□□ -2.32
XRN1-207ENST00000468894 SPRR2BP35325 72 aa0.56□□□□□ -2.32
XRN1-207ENST00000468894 DNAH17Q9UFH2 4485 aa0.55□□□□□ -2.32
XRN1-207ENST00000468894 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
XRN1-207ENST00000468894 SMR3BP02814 79 aaPredicted RBP0.54□□□□□ -2.32
XRN1-207ENST00000468894 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
XRN1-207ENST00000468894 STARD9Q9P2P6 4700 aa0.53□□□□□ -2.33
XRN1-207ENST00000468894 MT1AP04731 61 aa0.52□□□□□ -2.33
XRN1-207ENST00000468894 KRTAP19-6Q3LI70 58 aa0.52□□□□□ -2.33
XRN1-207ENST00000468894 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
XRN1-207ENST00000468894 SPRR2AP35326 72 aa0.51□□□□□ -2.33
XRN1-207ENST00000468894 DEFB124Q8NES8 71 aa0.51□□□□□ -2.33
XRN1-207ENST00000468894 A0A096LPF7 62 aa0.49□□□□□ -2.33
XRN1-207ENST00000468894 DEFB108BQ8NET1 73 aa0.48□□□□□ -2.33
XRN1-207ENST00000468894 MUC17Q685J3 4493 aa0.47□□□□□ -2.33
XRN1-207ENST00000468894 COX14Q96I36 57 aa0.47□□□□□ -2.33
XRN1-207ENST00000468894 DEFB133Q30KQ1 61 aa0.44□□□□□ -2.34
XRN1-207ENST00000468894 SPRR2EP22531 72 aa0.43□□□□□ -2.34
XRN1-207ENST00000468894 MT4P47944 62 aa0.43□□□□□ -2.34
XRN1-207ENST00000468894 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
XRN1-207ENST00000468894 RPS29P62273 56 aaKnown RBP0.41□□□□□ -2.34
XRN1-207ENST00000468894 LINC01556Q5JQF7 62 aa0.4□□□□□ -2.35
XRN1-207ENST00000468894 Q9Y3F1 56 aa0.35□□□□□ -2.35
XRN1-207ENST00000468894 DEFB4AO15263 64 aa0.31□□□□□ -2.36
XRN1-207ENST00000468894 MT1EP04732 61 aa0.31□□□□□ -2.36
XRN1-207ENST00000468894 HTN3P15516 51 aa0.31□□□□□ -2.36
XRN1-207ENST00000468894 MT1HP80294 61 aa0.31□□□□□ -2.36
XRN1-207ENST00000468894 CD52P31358 61 aa0.3□□□□□ -2.36
XRN1-207ENST00000468894 MT1LQ93083 61 aa0.28□□□□□ -2.36
XRN1-207ENST00000468894 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
XRN1-207ENST00000468894 MT1XP80297 61 aa0.23□□□□□ -2.37
XRN1-207ENST00000468894 MT1GP13640 62 aa0.21□□□□□ -2.38
XRN1-207ENST00000468894 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
XRN1-207ENST00000468894 KRTAP6-1Q3LI64 71 aa0.19□□□□□ -2.38
XRN1-207ENST00000468894 KRTAP19-7Q3SYF9 63 aa0.17□□□□□ -2.38
XRN1-207ENST00000468894 MT1HL1P0DM35 61 aa0.14□□□□□ -2.39
XRN1-207ENST00000468894 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
XRN1-207ENST00000468894 MT1MQ8N339 61 aa0.09□□□□□ -2.4
XRN1-207ENST00000468894 MT2AP02795 61 aa0.08□□□□□ -2.4
XRN1-207ENST00000468894 MT1BP07438 61 aa0.08□□□□□ -2.4
XRN1-207ENST00000468894 KRTAP19-2Q3LHN2 52 aa0.08□□□□□ -2.4
XRN1-207ENST00000468894 MT1FP04733 61 aa0□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 130.3 ms