RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ABRACLQ9P1F3 81 aa-1.14□□□□□ -2.59
VPS13A-209ENST00000467124 SMIM27A0A1W2PRY6 76 aa-1.15□□□□□ -2.59
VPS13A-209ENST00000467124 DDX60Q8IY21 1712 aaKnown RBP-1.15□□□□□ -2.59
VPS13A-209ENST00000467124 MADDQ8WXG6 1647 aa-1.15□□□□□ -2.59
VPS13A-209ENST00000467124 EFCAB6Q5THR3 1501 aa-1.15□□□□□ -2.59
VPS13A-209ENST00000467124 MROH2AA6NES4 1674 aa-1.16□□□□□ -2.59
VPS13A-209ENST00000467124 A0A096LNI7 61 aa-1.16□□□□□ -2.6
VPS13A-209ENST00000467124 LINC00308Q8TCZ7 52 aa-1.16□□□□□ -2.6
VPS13A-209ENST00000467124 TFF3Q07654 80 aa-1.17□□□□□ -2.6
VPS13A-209ENST00000467124 DEFB133Q30KQ1 61 aa-1.17□□□□□ -2.6
VPS13A-209ENST00000467124 M0R1W7 72 aa-1.19□□□□□ -2.6
VPS13A-209ENST00000467124 HTN1P15515 57 aa-1.19□□□□□ -2.6
VPS13A-209ENST00000467124 SYCP2Q9BX26 1530 aa-1.2□□□□□ -2.6
VPS13A-209ENST00000467124 DEFB131AP59861 70 aa-1.21□□□□□ -2.6
VPS13A-209ENST00000467124 NMES1Q9C002 83 aa-1.21□□□□□ -2.6
VPS13A-209ENST00000467124 NFAT5O94916 1531 aa-1.22□□□□□ -2.6
VPS13A-209ENST00000467124 IGIPA6NJ69 53 aa-1.23□□□□□ -2.61
VPS13A-209ENST00000467124 SMIM2Q9BVW6 85 aa-1.23□□□□□ -2.61
VPS13A-209ENST00000467124 TMEM167BQ9NRX6 74 aa-1.23□□□□□ -2.61
VPS13A-209ENST00000467124 RHPN1-AS1Q9BWJ2 59 aa-1.24□□□□□ -2.61
VPS13A-209ENST00000467124 IQGAP1P46940 1657 aa-1.24□□□□□ -2.61
VPS13A-209ENST00000467124 GOLGB1Q14789 3259 aaKnown RBP-1.25□□□□□ -2.61
VPS13A-209ENST00000467124 CD52P31358 61 aa-1.25□□□□□ -2.61
VPS13A-209ENST00000467124 CLTCL1P53675 1640 aa-1.26□□□□□ -2.61
VPS13A-209ENST00000467124 LINC01556Q5JQF7 62 aa-1.26□□□□□ -2.61
VPS13A-209ENST00000467124 TOMM7Q9P0U1 55 aa-1.26□□□□□ -2.61
VPS13A-209ENST00000467124 ABCA6Q8N139 1617 aa-1.26□□□□□ -2.61
VPS13A-209ENST00000467124 ADCY10Q96PN6 1610 aa-1.26□□□□□ -2.61
VPS13A-209ENST00000467124 AGLP35573 1532 aa-1.27□□□□□ -2.61
VPS13A-209ENST00000467124 DEFB124Q8NES8 71 aa-1.28□□□□□ -2.61
VPS13A-209ENST00000467124 UGGT1Q9NYU2 1555 aa-1.29□□□□□ -2.62
VPS13A-209ENST00000467124 LINC01590Q5TEZ4 76 aa-1.29□□□□□ -2.62
VPS13A-209ENST00000467124 DEFB104AQ8WTQ1 72 aa-1.29□□□□□ -2.62
VPS13A-209ENST00000467124 DUOX1Q9NRD9 1551 aa-1.3□□□□□ -2.62
VPS13A-209ENST00000467124 PRXQ9BXM0 1461 aa-1.31□□□□□ -2.62
VPS13A-209ENST00000467124 H0YGX0 51 aa-1.31□□□□□ -2.62
VPS13A-209ENST00000467124 ABCA5Q8WWZ7 1642 aa-1.33□□□□□ -2.62
VPS13A-209ENST00000467124 TRPM2O94759 1503 aa-1.33□□□□□ -2.62
VPS13A-209ENST00000467124 CPS1P31327 1500 aa-1.33□□□□□ -2.62
VPS13A-209ENST00000467124 APELAP0DMC3 54 aa-1.34□□□□□ -2.62
VPS13A-209ENST00000467124 ABCC8Q09428 1581 aa-1.34□□□□□ -2.62
VPS13A-209ENST00000467124 EFCAB5A4FU69 1503 aa-1.35□□□□□ -2.62
VPS13A-209ENST00000467124 NDUFA1O15239 70 aa-1.35□□□□□ -2.63
VPS13A-209ENST00000467124 SERF2P84101 59 aa-1.35□□□□□ -2.63
VPS13A-209ENST00000467124 TOP2AP11388 1531 aaKnown RBP-1.35□□□□□ -2.63
VPS13A-209ENST00000467124 A0A096LPF7 62 aa-1.36□□□□□ -2.63
VPS13A-209ENST00000467124 PLNP26678 52 aa-1.36□□□□□ -2.63
VPS13A-209ENST00000467124 RPL39P62891 51 aaKnown RBP-1.36□□□□□ -2.63
VPS13A-209ENST00000467124 ERICH3Q5RHP9 1530 aa-1.36□□□□□ -2.63
VPS13A-209ENST00000467124 S100ZQ8WXG8 99 aa-1.37□□□□□ -2.63
VPS13A-209ENST00000467124 RPL39LQ96EH5 51 aaKnown RBP-1.38□□□□□ -2.63
VPS13A-209ENST00000467124 HTN3P15516 51 aa-1.41□□□□□ -2.64
VPS13A-209ENST00000467124 ATP7AQ04656 1500 aa-1.41□□□□□ -2.64
VPS13A-209ENST00000467124 ABCA10Q8WWZ4 1543 aa-1.41□□□□□ -2.64
VPS13A-209ENST00000467124 SAMD9LQ8IVG5 1584 aa-1.42□□□□□ -2.64
VPS13A-209ENST00000467124 FANCD2Q9BXW9 1451 aa-1.43□□□□□ -2.64
VPS13A-209ENST00000467124 A0A087WWC5 75 aa-1.43□□□□□ -2.64
VPS13A-209ENST00000467124 MROH2BQ7Z745 1585 aa-1.45□□□□□ -2.64
VPS13A-209ENST00000467124 H3BUX3 64 aa-1.46□□□□□ -2.64
VPS13A-209ENST00000467124 CMC2Q9NRP2 79 aa-1.48□□□□□ -2.65
VPS13A-209ENST00000467124 H3BSH0 61 aa-1.49□□□□□ -2.65
VPS13A-209ENST00000467124 K7EIM0 57 aa-1.52□□□□□ -2.65
VPS13A-209ENST00000467124 PRCDQ00LT1 54 aa-1.54□□□□□ -2.66
VPS13A-209ENST00000467124 TMEM167AQ8TBQ9 72 aa-1.54□□□□□ -2.66
VPS13A-209ENST00000467124 SMIM5Q71RC9 77 aa-1.55□□□□□ -2.66
VPS13A-209ENST00000467124 IQGAP2Q13576 1575 aa-1.55□□□□□ -2.66
VPS13A-209ENST00000467124 ARHGAP5-AS1Q96IT6 56 aa-1.56□□□□□ -2.66
VPS13A-209ENST00000467124 SNRPGP15A8MWD9 76 aa-1.6□□□□□ -2.67
VPS13A-209ENST00000467124 DEFB108AA8MXU0 73 aa-1.61□□□□□ -2.67
VPS13A-209ENST00000467124 RPL39P5Q59GN2 51 aa-1.61□□□□□ -2.67
VPS13A-209ENST00000467124 DEFB108BQ8NET1 73 aa-1.65□□□□□ -2.67
VPS13A-209ENST00000467124 TOMM5Q8N4H5 51 aa-1.68□□□□□ -2.68
VPS13A-209ENST00000467124 COX14Q96I36 57 aa-1.68□□□□□ -2.68
VPS13A-209ENST00000467124 Q9Y3F1 56 aa-1.68□□□□□ -2.68
VPS13A-209ENST00000467124 STATHP02808 62 aa-1.69□□□□□ -2.68
VPS13A-209ENST00000467124 SNRPGP62308 76 aaKnown RBP-1.69□□□□□ -2.68
VPS13A-209ENST00000467124 GCC2Q8IWJ2 1684 aa-1.7□□□□□ -2.68
VPS13A-209ENST00000467124 SMIM31A0A1B0GVY4 71 aa-1.7□□□□□ -2.68
Retrieved 78 of 20,778 RNA–protein pairs in 211.4 ms