RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 SPRR2EP22531 72 aa3.88□□□□□ -1.79
PTPDC1-203ENST00000467049 SPRR2BP35325 72 aa3.88□□□□□ -1.79
PTPDC1-203ENST00000467049 SPRR2AP35326 72 aa3.88□□□□□ -1.79
PTPDC1-203ENST00000467049 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
PTPDC1-203ENST00000467049 H0YAA0 97 aa3.84□□□□□ -1.8
PTPDC1-203ENST00000467049 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.8
PTPDC1-203ENST00000467049 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
PTPDC1-203ENST00000467049 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
PTPDC1-203ENST00000467049 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
PTPDC1-203ENST00000467049 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
PTPDC1-203ENST00000467049 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
PTPDC1-203ENST00000467049 MT1XP80297 61 aa3.76□□□□□ -1.81
PTPDC1-203ENST00000467049 SPRR2DP22532 72 aa3.75□□□□□ -1.81
PTPDC1-203ENST00000467049 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
PTPDC1-203ENST00000467049 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
PTPDC1-203ENST00000467049 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PTPDC1-203ENST00000467049 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
PTPDC1-203ENST00000467049 M0QZ58 72 aa3.64□□□□□ -1.83
PTPDC1-203ENST00000467049 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
PTPDC1-203ENST00000467049 A0A0D9SG42 100 aa3.62□□□□□ -1.83
PTPDC1-203ENST00000467049 R4GN34 69 aa3.59□□□□□ -1.83
PTPDC1-203ENST00000467049 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
PTPDC1-203ENST00000467049 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
PTPDC1-203ENST00000467049 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
PTPDC1-203ENST00000467049 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
PTPDC1-203ENST00000467049 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
PTPDC1-203ENST00000467049 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
PTPDC1-203ENST00000467049 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
PTPDC1-203ENST00000467049 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
PTPDC1-203ENST00000467049 MT1EP04732 61 aa3.35□□□□□ -1.87
PTPDC1-203ENST00000467049 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
PTPDC1-203ENST00000467049 INE1O15225 51 aa3.34□□□□□ -1.87
PTPDC1-203ENST00000467049 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
PTPDC1-203ENST00000467049 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
PTPDC1-203ENST00000467049 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
PTPDC1-203ENST00000467049 MT4P47944 62 aa3.28□□□□□ -1.88
PTPDC1-203ENST00000467049 MT1GP13640 62 aa3.27□□□□□ -1.89
PTPDC1-203ENST00000467049 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
PTPDC1-203ENST00000467049 TNP1P09430 55 aa3.23□□□□□ -1.89
PTPDC1-203ENST00000467049 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
PTPDC1-203ENST00000467049 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
PTPDC1-203ENST00000467049 MT1MQ8N339 61 aa3.21□□□□□ -1.9
PTPDC1-203ENST00000467049 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
PTPDC1-203ENST00000467049 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
PTPDC1-203ENST00000467049 MT1LQ93083 61 aa3.16□□□□□ -1.9
PTPDC1-203ENST00000467049 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
PTPDC1-203ENST00000467049 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
PTPDC1-203ENST00000467049 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
PTPDC1-203ENST00000467049 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PTPDC1-203ENST00000467049 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
PTPDC1-203ENST00000467049 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
PTPDC1-203ENST00000467049 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
PTPDC1-203ENST00000467049 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
PTPDC1-203ENST00000467049 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
PTPDC1-203ENST00000467049 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
PTPDC1-203ENST00000467049 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
PTPDC1-203ENST00000467049 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
PTPDC1-203ENST00000467049 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
PTPDC1-203ENST00000467049 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
PTPDC1-203ENST00000467049 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
PTPDC1-203ENST00000467049 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PTPDC1-203ENST00000467049 MT1AP04731 61 aa2.71□□□□□ -1.98
PTPDC1-203ENST00000467049 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
PTPDC1-203ENST00000467049 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
PTPDC1-203ENST00000467049 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
PTPDC1-203ENST00000467049 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
PTPDC1-203ENST00000467049 MT3P25713 68 aa2.48□□□□□ -2.01
PTPDC1-203ENST00000467049 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PTPDC1-203ENST00000467049 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PTPDC1-203ENST00000467049 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
PTPDC1-203ENST00000467049 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.08
PTPDC1-203ENST00000467049 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
PTPDC1-203ENST00000467049 PRM1P04553 51 aa2.03□□□□□ -2.09
PTPDC1-203ENST00000467049 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
PTPDC1-203ENST00000467049 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
PTPDC1-203ENST00000467049 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
PTPDC1-203ENST00000467049 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
PTPDC1-203ENST00000467049 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 314.8 ms