RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 VPS13BQ7Z7G8 4022 aa1.07□□□□□ -2.24
VPS8-217ENST00000465213 DNAH2Q9P225 4427 aa1.07□□□□□ -2.24
VPS8-217ENST00000465213 CD52P31358 61 aa1.06□□□□□ -2.24
VPS8-217ENST00000465213 HRNRQ86YZ3 2850 aaPredicted RBP1.06□□□□□ -2.24
VPS8-217ENST00000465213 DNAH17Q9UFH2 4485 aa1.05□□□□□ -2.24
VPS8-217ENST00000465213 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
VPS8-217ENST00000465213 M0QZ58 72 aa1.04□□□□□ -2.24
VPS8-217ENST00000465213 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
VPS8-217ENST00000465213 U3KQA8 63 aa1.04□□□□□ -2.24
VPS8-217ENST00000465213 LPAP08519 4548 aa1.02□□□□□ -2.25
VPS8-217ENST00000465213 TNXBP22105 4242 aa1.02□□□□□ -2.25
VPS8-217ENST00000465213 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
VPS8-217ENST00000465213 C9orf92A6NGG3 77 aa1□□□□□ -2.25
VPS8-217ENST00000465213 LINC01590Q5TEZ4 76 aa1□□□□□ -2.25
VPS8-217ENST00000465213 LEAP2Q969E1 77 aa1□□□□□ -2.25
VPS8-217ENST00000465213 MUC17Q685J3 4493 aa1□□□□□ -2.25
VPS8-217ENST00000465213 STATHP02808 62 aa0.97□□□□□ -2.25
VPS8-217ENST00000465213 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
VPS8-217ENST00000465213 TOMM7Q9P0U1 55 aa0.97□□□□□ -2.25
VPS8-217ENST00000465213 PRCDQ00LT1 54 aa0.96□□□□□ -2.26
VPS8-217ENST00000465213 SPRR2EP22531 72 aa0.95□□□□□ -2.26
VPS8-217ENST00000465213 SPRR2BP35325 72 aa0.95□□□□□ -2.26
VPS8-217ENST00000465213 SPRR2AP35326 72 aa0.95□□□□□ -2.26
VPS8-217ENST00000465213 TTTY10Q9BZA0 68 aa0.95□□□□□ -2.26
VPS8-217ENST00000465213 TNP1P09430 55 aa0.93□□□□□ -2.26
VPS8-217ENST00000465213 PRM1P04553 51 aa0.92□□□□□ -2.26
VPS8-217ENST00000465213 SPRR2DP22532 72 aa0.92□□□□□ -2.26
VPS8-217ENST00000465213 DEFB133Q30KQ1 61 aa0.92□□□□□ -2.26
VPS8-217ENST00000465213 MT1HL1P0DM35 61 aa0.91□□□□□ -2.26
VPS8-217ENST00000465213 DEFB104AQ8WTQ1 72 aa0.91□□□□□ -2.26
VPS8-217ENST00000465213 DNAH8Q96JB1 4490 aa0.89□□□□□ -2.27
VPS8-217ENST00000465213 MT4P47944 62 aa0.88□□□□□ -2.27
VPS8-217ENST00000465213 H3BNG1 76 aa0.87□□□□□ -2.27
VPS8-217ENST00000465213 DEFB108AA8MXU0 73 aa0.86□□□□□ -2.27
VPS8-217ENST00000465213 K7EIM0 57 aa0.86□□□□□ -2.27
VPS8-217ENST00000465213 H3BSH0 61 aa0.84□□□□□ -2.27
VPS8-217ENST00000465213 MT1HP80294 61 aa0.83□□□□□ -2.28
VPS8-217ENST00000465213 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
VPS8-217ENST00000465213 DEFB110Q30KQ9 67 aa0.8□□□□□ -2.28
VPS8-217ENST00000465213 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
VPS8-217ENST00000465213 TMEM167AQ8TBQ9 72 aa0.79□□□□□ -2.28
VPS8-217ENST00000465213 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
VPS8-217ENST00000465213 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
VPS8-217ENST00000465213 SPART-AS1P0CW21 52 aa0.78□□□□□ -2.28
VPS8-217ENST00000465213 SPRR2FQ96RM1 72 aa0.78□□□□□ -2.28
VPS8-217ENST00000465213 COX14Q96I36 57 aa0.77□□□□□ -2.29
VPS8-217ENST00000465213 DEFB108BQ8NET1 73 aa0.75□□□□□ -2.29
VPS8-217ENST00000465213 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
VPS8-217ENST00000465213 KRTAP19-2Q3LHN2 52 aa0.71□□□□□ -2.3
VPS8-217ENST00000465213 MT1AP04731 61 aa0.69□□□□□ -2.3
VPS8-217ENST00000465213 H3BUX3 64 aa0.67□□□□□ -2.3
VPS8-217ENST00000465213 RHPN1-AS1Q9BWJ2 59 aa0.66□□□□□ -2.3
VPS8-217ENST00000465213 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
VPS8-217ENST00000465213 RPL39P5Q59GN2 51 aa0.65□□□□□ -2.31
VPS8-217ENST00000465213 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
VPS8-217ENST00000465213 DEFB136Q30KP8 78 aa0.61□□□□□ -2.31
VPS8-217ENST00000465213 MT2AP02795 61 aa0.59□□□□□ -2.31
VPS8-217ENST00000465213 MT1FP04733 61 aa0.59□□□□□ -2.31
VPS8-217ENST00000465213 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
VPS8-217ENST00000465213 DEFB4AO15263 64 aa0.54□□□□□ -2.32
VPS8-217ENST00000465213 A0A096LNI7 61 aa0.5□□□□□ -2.33
VPS8-217ENST00000465213 HTN3P15516 51 aa0.48□□□□□ -2.33
VPS8-217ENST00000465213 A0A096LPF7 62 aa0.47□□□□□ -2.33
VPS8-217ENST00000465213 DEFB1P60022 68 aa0.47□□□□□ -2.33
VPS8-217ENST00000465213 LINC01556Q5JQF7 62 aa0.47□□□□□ -2.33
VPS8-217ENST00000465213 MT1BP07438 61 aa0.42□□□□□ -2.34
VPS8-217ENST00000465213 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
VPS8-217ENST00000465213 APELAP0DMC3 54 aa0.41□□□□□ -2.34
VPS8-217ENST00000465213 HTN1P15515 57 aa0.41□□□□□ -2.34
VPS8-217ENST00000465213 KRTAP19-8Q3LI54 63 aa0.41□□□□□ -2.34
VPS8-217ENST00000465213 MT1EP04732 61 aa0.36□□□□□ -2.35
VPS8-217ENST00000465213 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
VPS8-217ENST00000465213 MT1GP13640 62 aa0.35□□□□□ -2.35
VPS8-217ENST00000465213 MT1XP80297 61 aa0.32□□□□□ -2.36
VPS8-217ENST00000465213 MT1MQ8N339 61 aa0.31□□□□□ -2.36
VPS8-217ENST00000465213 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
VPS8-217ENST00000465213 MT1LQ93083 61 aa0.3□□□□□ -2.36
VPS8-217ENST00000465213 KRTAP6-1Q3LI64 71 aa0.2□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 54.6 ms