RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ABCA10Q8WWZ4 1543 aa-1.41□□□□□ -2.64
GARNL3-213ENST00000464616 UGGT1Q9NYU2 1555 aa-1.42□□□□□ -2.64
GARNL3-213ENST00000464616 DEFB131AP59861 70 aa-1.43□□□□□ -2.64
GARNL3-213ENST00000464616 RPS29P62273 56 aaKnown RBP-1.44□□□□□ -2.64
GARNL3-213ENST00000464616 ASPMQ8IZT6 3477 aa-1.45□□□□□ -2.64
GARNL3-213ENST00000464616 EFCAB6Q5THR3 1501 aa-1.45□□□□□ -2.64
GARNL3-213ENST00000464616 SMIM5Q71RC9 77 aa-1.45□□□□□ -2.64
GARNL3-213ENST00000464616 BRCA2P51587 3418 aa-1.46□□□□□ -2.64
GARNL3-213ENST00000464616 KRTAP19-2Q3LHN2 52 aa-1.47□□□□□ -2.64
GARNL3-213ENST00000464616 CPS1P31327 1500 aa-1.49□□□□□ -2.65
GARNL3-213ENST00000464616 CDH23Q9H251 3354 aa-1.5□□□□□ -2.65
GARNL3-213ENST00000464616 LMO7Q8WWI1 1683 aa-1.51□□□□□ -2.65
GARNL3-213ENST00000464616 PLNP26678 52 aa-1.53□□□□□ -2.65
GARNL3-213ENST00000464616 VPS13AQ96RL7 3174 aa-1.54□□□□□ -2.66
GARNL3-213ENST00000464616 DEFB136Q30KP8 78 aa-1.55□□□□□ -2.66
GARNL3-213ENST00000464616 MROH2AA6NES4 1674 aa-1.56□□□□□ -2.66
GARNL3-213ENST00000464616 ABCA5Q8WWZ7 1642 aa-1.56□□□□□ -2.66
GARNL3-213ENST00000464616 SYCP2Q9BX26 1530 aa-1.57□□□□□ -2.66
GARNL3-213ENST00000464616 POLR2KP53803 58 aaKnown RBP-1.59□□□□□ -2.66
GARNL3-213ENST00000464616 LEAP2Q969E1 77 aa-1.59□□□□□ -2.66
GARNL3-213ENST00000464616 AGLP35573 1532 aa-1.6□□□□□ -2.67
GARNL3-213ENST00000464616 PRXQ9BXM0 1461 aa-1.61□□□□□ -2.67
GARNL3-213ENST00000464616 ADCY10Q96PN6 1610 aa-1.62□□□□□ -2.67
GARNL3-213ENST00000464616 UTRNP46939 3433 aa-1.62□□□□□ -2.67
GARNL3-213ENST00000464616 SMIM2Q9BVW6 85 aa-1.62□□□□□ -2.67
GARNL3-213ENST00000464616 XIRP2A4UGR9 3374 aa-1.64□□□□□ -2.67
GARNL3-213ENST00000464616 SMIM31A0A1B0GVY4 71 aa-1.64□□□□□ -2.67
GARNL3-213ENST00000464616 TFF3Q07654 80 aa-1.68□□□□□ -2.68
GARNL3-213ENST00000464616 CMC2Q9NRP2 79 aa-1.68□□□□□ -2.68
GARNL3-213ENST00000464616 TRPM2O94759 1503 aa-1.68□□□□□ -2.68
GARNL3-213ENST00000464616 DDX60Q8IY21 1712 aaKnown RBP-1.69□□□□□ -2.68
GARNL3-213ENST00000464616 NRXN3Q9Y4C0 1643 aa-1.69□□□□□ -2.68
GARNL3-213ENST00000464616 ABCC8Q09428 1581 aa-1.71□□□□□ -2.68
GARNL3-213ENST00000464616 TTTY10Q9BZA0 68 aa-1.71□□□□□ -2.68
GARNL3-213ENST00000464616 GOLGB1Q14789 3259 aaKnown RBP-1.72□□□□□ -2.68
GARNL3-213ENST00000464616 CLTCL1P53675 1640 aa-1.73□□□□□ -2.69
GARNL3-213ENST00000464616 FANCD2Q9BXW9 1451 aa-1.76□□□□□ -2.69
GARNL3-213ENST00000464616 IQGAP1P46940 1657 aa-1.78□□□□□ -2.69
GARNL3-213ENST00000464616 NDUFA1O15239 70 aa-1.84□□□□□ -2.7
GARNL3-213ENST00000464616 ERICH3Q5RHP9 1530 aa-1.85□□□□□ -2.71
GARNL3-213ENST00000464616 NFAT5O94916 1531 aa-1.88□□□□□ -2.71
GARNL3-213ENST00000464616 DEFB133Q30KQ1 61 aa-1.95□□□□□ -2.72
GARNL3-213ENST00000464616 DEFB104AQ8WTQ1 72 aa-1.97□□□□□ -2.72
GARNL3-213ENST00000464616 SNRPGP15A8MWD9 76 aa-2□□□□□ -2.73
GARNL3-213ENST00000464616 A0A096LNI7 61 aa-2.02□□□□□ -2.73
GARNL3-213ENST00000464616 LINC01590Q5TEZ4 76 aa-2.02□□□□□ -2.73
GARNL3-213ENST00000464616 HTN1P15515 57 aa-2.03□□□□□ -2.73
GARNL3-213ENST00000464616 CD52P31358 61 aa-2.03□□□□□ -2.73
GARNL3-213ENST00000464616 TOMM7Q9P0U1 55 aa-2.05□□□□□ -2.74
GARNL3-213ENST00000464616 RHPN1-AS1Q9BWJ2 59 aa-2.08□□□□□ -2.74
GARNL3-213ENST00000464616 LINC01556Q5JQF7 62 aa-2.09□□□□□ -2.74
GARNL3-213ENST00000464616 DEFB124Q8NES8 71 aa-2.1□□□□□ -2.75
GARNL3-213ENST00000464616 SAMD9LQ8IVG5 1584 aa-2.16□□□□□ -2.76
GARNL3-213ENST00000464616 IQGAP2Q13576 1575 aa-2.19□□□□□ -2.76
GARNL3-213ENST00000464616 DUOX1Q9NRD9 1551 aa-2.24□□□□□ -2.77
GARNL3-213ENST00000464616 APELAP0DMC3 54 aa-2.27□□□□□ -2.77
GARNL3-213ENST00000464616 TOMM5Q8N4H5 51 aa-2.27□□□□□ -2.77
GARNL3-213ENST00000464616 RPL39P62891 51 aaKnown RBP-2.28□□□□□ -2.77
GARNL3-213ENST00000464616 ATP7AQ04656 1500 aa-2.29□□□□□ -2.78
GARNL3-213ENST00000464616 TOP2AP11388 1531 aaKnown RBP-2.3□□□□□ -2.78
GARNL3-213ENST00000464616 A0A096LPF7 62 aa-2.3□□□□□ -2.78
GARNL3-213ENST00000464616 HTN3P15516 51 aa-2.34□□□□□ -2.78
GARNL3-213ENST00000464616 MROH2BQ7Z745 1585 aa-2.37□□□□□ -2.79
GARNL3-213ENST00000464616 H3BUX3 64 aa-2.4□□□□□ -2.79
GARNL3-213ENST00000464616 RPL39LQ96EH5 51 aaKnown RBP-2.41□□□□□ -2.8
GARNL3-213ENST00000464616 H3BSH0 61 aa-2.43□□□□□ -2.8
GARNL3-213ENST00000464616 PRCDQ00LT1 54 aa-2.55□□□□□ -2.82
GARNL3-213ENST00000464616 K7EIM0 57 aa-2.56□□□□□ -2.82
GARNL3-213ENST00000464616 TMEM167AQ8TBQ9 72 aa-2.57□□□□□ -2.82
GARNL3-213ENST00000464616 DEFB108BQ8NET1 73 aa-2.63□□□□□ -2.83
GARNL3-213ENST00000464616 ARHGAP5-AS1Q96IT6 56 aa-2.64□□□□□ -2.83
GARNL3-213ENST00000464616 STATHP02808 62 aa-2.67□□□□□ -2.84
GARNL3-213ENST00000464616 COX14Q96I36 57 aa-2.67□□□□□ -2.84
GARNL3-213ENST00000464616 Q9Y3F1 56 aa-2.67□□□□□ -2.84
GARNL3-213ENST00000464616 DEFB108AA8MXU0 73 aa-2.72□□□□□ -2.84
GARNL3-213ENST00000464616 RPL39P5Q59GN2 51 aa-2.72□□□□□ -2.84
GARNL3-213ENST00000464616 GCC2Q8IWJ2 1684 aa-2.83□□□□□ -2.86
GARNL3-213ENST00000464616 SNRPGP62308 76 aaKnown RBP-2.85□□□□□ -2.87
Retrieved 78 of 20,778 RNA–protein pairs in 19.2 ms