RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 NMES1Q9C002 83 aa-3.27□□□□□ -2.93
PTPN12-210ENST00000464313 NRXN3Q9Y4C0 1643 aa-3.27□□□□□ -2.93
PTPN12-210ENST00000464313 ABCA6Q8N139 1617 aa-3.28□□□□□ -2.93
PTPN12-210ENST00000464313 XIRP2A4UGR9 3374 aa-3.29□□□□□ -2.94
PTPN12-210ENST00000464313 UTRNP46939 3433 aa-3.29□□□□□ -2.94
PTPN12-210ENST00000464313 IGIPA6NJ69 53 aa-3.3□□□□□ -2.94
PTPN12-210ENST00000464313 EFCAB6Q5THR3 1501 aa-3.32□□□□□ -2.94
PTPN12-210ENST00000464313 POLR2KP53803 58 aaKnown RBP-3.41□□□□□ -2.96
PTPN12-210ENST00000464313 H0YGX0 51 aa-3.46□□□□□ -2.96
PTPN12-210ENST00000464313 EFCAB5A4FU69 1503 aa-3.49□□□□□ -2.97
PTPN12-210ENST00000464313 DEFB131AP59861 70 aa-3.49□□□□□ -2.97
PTPN12-210ENST00000464313 GOLGB1Q14789 3259 aaKnown RBP-3.5□□□□□ -2.97
PTPN12-210ENST00000464313 CD52P31358 61 aa-3.51□□□□□ -2.97
PTPN12-210ENST00000464313 DEFB133Q30KQ1 61 aa-3.52□□□□□ -2.97
PTPN12-210ENST00000464313 UGGT1Q9NYU2 1555 aa-3.54□□□□□ -2.98
PTPN12-210ENST00000464313 S100ZQ8WXG8 99 aa-3.54□□□□□ -2.98
PTPN12-210ENST00000464313 LMO7Q8WWI1 1683 aa-3.55□□□□□ -2.98
PTPN12-210ENST00000464313 DEFB104AQ8WTQ1 72 aa-3.56□□□□□ -2.98
PTPN12-210ENST00000464313 CCDC180Q9P1Z9 1646 aa-3.58□□□□□ -2.98
PTPN12-210ENST00000464313 TFF3Q07654 80 aa-3.59□□□□□ -2.98
PTPN12-210ENST00000464313 A0A087WWC5 75 aa-3.61□□□□□ -2.99
PTPN12-210ENST00000464313 SYCP2Q9BX26 1530 aa-3.61□□□□□ -2.99
PTPN12-210ENST00000464313 CPS1P31327 1500 aa-3.63□□□□□ -2.99
PTPN12-210ENST00000464313 ABCA10Q8WWZ4 1543 aa-3.67□□□□□ -3
PTPN12-210ENST00000464313 SCRIBQ14160 1630 aa-3.67□□□□□ -3
PTPN12-210ENST00000464313 AGLP35573 1532 aa-3.7□□□□□ -3
PTPN12-210ENST00000464313 MROH2AA6NES4 1674 aa-3.7□□□□□ -3
PTPN12-210ENST00000464313 HTN1P15515 57 aa-3.7□□□□□ -3
PTPN12-210ENST00000464313 RHPN1-AS1Q9BWJ2 59 aa-3.71□□□□□ -3
PTPN12-210ENST00000464313 PLNP26678 52 aa-3.74□□□□□ -3.01
PTPN12-210ENST00000464313 SMIM2Q9BVW6 85 aa-3.81□□□□□ -3.02
PTPN12-210ENST00000464313 NFAT5O94916 1531 aa-3.82□□□□□ -3.02
PTPN12-210ENST00000464313 A0A096LNI7 61 aa-3.84□□□□□ -3.02
PTPN12-210ENST00000464313 SMIM5Q71RC9 77 aa-3.84□□□□□ -3.02
PTPN12-210ENST00000464313 ABCA5Q8WWZ7 1642 aa-3.88□□□□□ -3.03
PTPN12-210ENST00000464313 PRXQ9BXM0 1461 aa-3.89□□□□□ -3.03
PTPN12-210ENST00000464313 DEFB124Q8NES8 71 aa-3.9□□□□□ -3.03
PTPN12-210ENST00000464313 DDX60Q8IY21 1712 aaKnown RBP-3.9□□□□□ -3.03
PTPN12-210ENST00000464313 LINC01556Q5JQF7 62 aa-3.92□□□□□ -3.04
PTPN12-210ENST00000464313 LINC01590Q5TEZ4 76 aa-3.94□□□□□ -3.04
PTPN12-210ENST00000464313 IQGAP1P46940 1657 aa-3.97□□□□□ -3.04
PTPN12-210ENST00000464313 CLTCL1P53675 1640 aa-3.99□□□□□ -3.05
PTPN12-210ENST00000464313 TRPM2O94759 1503 aa-4□□□□□ -3.05
PTPN12-210ENST00000464313 ADCY10Q96PN6 1610 aa-4.07□□□□□ -3.06
PTPN12-210ENST00000464313 TOMM7Q9P0U1 55 aa-4.09□□□□□ -3.06
PTPN12-210ENST00000464313 CMC2Q9NRP2 79 aa-4.1□□□□□ -3.07
PTPN12-210ENST00000464313 ABCC8Q09428 1581 aa-4.1□□□□□ -3.07
PTPN12-210ENST00000464313 NDUFA1O15239 70 aa-4.16□□□□□ -3.08
PTPN12-210ENST00000464313 FANCD2Q9BXW9 1451 aa-4.17□□□□□ -3.08
PTPN12-210ENST00000464313 SMIM31A0A1B0GVY4 71 aa-4.32□□□□□ -3.1
PTPN12-210ENST00000464313 DUOX1Q9NRD9 1551 aa-4.34□□□□□ -3.1
PTPN12-210ENST00000464313 H3BUX3 64 aa-4.34□□□□□ -3.1
PTPN12-210ENST00000464313 APELAP0DMC3 54 aa-4.34□□□□□ -3.1
PTPN12-210ENST00000464313 TOP2AP11388 1531 aaKnown RBP-4.36□□□□□ -3.11
PTPN12-210ENST00000464313 A0A096LPF7 62 aa-4.41□□□□□ -3.12
PTPN12-210ENST00000464313 HTN3P15516 51 aa-4.42□□□□□ -3.12
PTPN12-210ENST00000464313 ATP7AQ04656 1500 aa-4.45□□□□□ -3.12
PTPN12-210ENST00000464313 ERICH3Q5RHP9 1530 aa-4.51□□□□□ -3.13
PTPN12-210ENST00000464313 RPL39P62891 51 aaKnown RBP-4.58□□□□□ -3.14
PTPN12-210ENST00000464313 SAMD9LQ8IVG5 1584 aa-4.6□□□□□ -3.15
PTPN12-210ENST00000464313 H3BSH0 61 aa-4.61□□□□□ -3.15
PTPN12-210ENST00000464313 RPL39LQ96EH5 51 aaKnown RBP-4.68□□□□□ -3.16
PTPN12-210ENST00000464313 MROH2BQ7Z745 1585 aa-4.7□□□□□ -3.16
PTPN12-210ENST00000464313 PRCDQ00LT1 54 aa-4.74□□□□□ -3.17
PTPN12-210ENST00000464313 Q9Y3F1 56 aa-4.74□□□□□ -3.17
PTPN12-210ENST00000464313 SNRPGP15A8MWD9 76 aa-4.76□□□□□ -3.17
PTPN12-210ENST00000464313 TMEM167AQ8TBQ9 72 aa-4.77□□□□□ -3.17
PTPN12-210ENST00000464313 K7EIM0 57 aa-4.79□□□□□ -3.18
PTPN12-210ENST00000464313 COX14Q96I36 57 aa-4.88□□□□□ -3.19
PTPN12-210ENST00000464313 ARHGAP5-AS1Q96IT6 56 aa-4.94□□□□□ -3.2
PTPN12-210ENST00000464313 IQGAP2Q13576 1575 aa-4.97□□□□□ -3.21
PTPN12-210ENST00000464313 DEFB108BQ8NET1 73 aa-5.06□□□□□ -3.22
PTPN12-210ENST00000464313 STATHP02808 62 aa-5.11□□□□□ -3.23
PTPN12-210ENST00000464313 TOMM5Q8N4H5 51 aa-5.12□□□□□ -3.23
PTPN12-210ENST00000464313 RPL39P5Q59GN2 51 aa-5.26□□□□□ -3.25
PTPN12-210ENST00000464313 DEFB108AA8MXU0 73 aa-5.27□□□□□ -3.25
PTPN12-210ENST00000464313 SNRPGP62308 76 aaKnown RBP-5.31□□□□□ -3.26
PTPN12-210ENST00000464313 GCC2Q8IWJ2 1684 aa-5.37□□□□□ -3.27
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms