RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
SGCE-209ENST00000462731 KMT2DO14686 5537 aa1.31□□□□□ -2.2
SGCE-209ENST00000462731 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
SGCE-209ENST00000462731 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
SGCE-209ENST00000462731 TOMM7Q9P0U1 55 aa1.3□□□□□ -2.2
SGCE-209ENST00000462731 LINC01590Q5TEZ4 76 aa1.27□□□□□ -2.21
SGCE-209ENST00000462731 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
SGCE-209ENST00000462731 Q9Y3F1 56 aa1.25□□□□□ -2.21
SGCE-209ENST00000462731 TNP1P09430 55 aa1.24□□□□□ -2.21
SGCE-209ENST00000462731 DNAH8Q96JB1 4490 aa1.24□□□□□ -2.21
SGCE-209ENST00000462731 TTTY10Q9BZA0 68 aa1.23□□□□□ -2.21
SGCE-209ENST00000462731 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
SGCE-209ENST00000462731 LPAP08519 4548 aa1.23□□□□□ -2.21
SGCE-209ENST00000462731 H3BNG1 76 aa1.22□□□□□ -2.21
SGCE-209ENST00000462731 PRCDQ00LT1 54 aa1.22□□□□□ -2.21
SGCE-209ENST00000462731 CD52P31358 61 aa1.21□□□□□ -2.22
SGCE-209ENST00000462731 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
SGCE-209ENST00000462731 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SGCE-209ENST00000462731 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
SGCE-209ENST00000462731 SPRR2DP22532 72 aa1.14□□□□□ -2.23
SGCE-209ENST00000462731 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
SGCE-209ENST00000462731 H3BSH0 61 aa1.09□□□□□ -2.23
SGCE-209ENST00000462731 K7EIM0 57 aa1.08□□□□□ -2.24
SGCE-209ENST00000462731 STATHP02808 62 aa1.08□□□□□ -2.24
SGCE-209ENST00000462731 DEFB110Q30KQ9 67 aa1.08□□□□□ -2.24
SGCE-209ENST00000462731 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
SGCE-209ENST00000462731 SPRR2BP35325 72 aa1.07□□□□□ -2.24
SGCE-209ENST00000462731 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
SGCE-209ENST00000462731 DEFB104AQ8WTQ1 72 aa1.07□□□□□ -2.24
SGCE-209ENST00000462731 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
SGCE-209ENST00000462731 SPART-AS1P0CW21 52 aa1.05□□□□□ -2.24
SGCE-209ENST00000462731 DEFB133Q30KQ1 61 aa1.03□□□□□ -2.24
SGCE-209ENST00000462731 FLGP20930 4061 aaPredicted RBP0.99□□□□□ -2.25
SGCE-209ENST00000462731 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
SGCE-209ENST00000462731 DEFB108AA8MXU0 73 aa0.96□□□□□ -2.26
SGCE-209ENST00000462731 TMEM167AQ8TBQ9 72 aa0.96□□□□□ -2.26
SGCE-209ENST00000462731 MT1AP04731 61 aa0.95□□□□□ -2.26
SGCE-209ENST00000462731 MT1HL1P0DM35 61 aa0.93□□□□□ -2.26
SGCE-209ENST00000462731 SPRR2AP35326 72 aa0.93□□□□□ -2.26
SGCE-209ENST00000462731 SMR3BP02814 79 aaPredicted RBP0.92□□□□□ -2.26
SGCE-209ENST00000462731 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
SGCE-209ENST00000462731 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
SGCE-209ENST00000462731 SPRR2EP22531 72 aa0.85□□□□□ -2.27
SGCE-209ENST00000462731 MT1HP80294 61 aa0.84□□□□□ -2.27
SGCE-209ENST00000462731 KRTAP19-2Q3LHN2 52 aa0.79□□□□□ -2.28
SGCE-209ENST00000462731 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
SGCE-209ENST00000462731 RHPN1-AS1Q9BWJ2 59 aa0.78□□□□□ -2.28
SGCE-209ENST00000462731 MT4P47944 62 aa0.77□□□□□ -2.29
SGCE-209ENST00000462731 RPL39P5Q59GN2 51 aa0.77□□□□□ -2.29
SGCE-209ENST00000462731 DEFB108BQ8NET1 73 aa0.77□□□□□ -2.29
SGCE-209ENST00000462731 H3BUX3 64 aa0.76□□□□□ -2.29
SGCE-209ENST00000462731 SPRR2FQ96RM1 72 aa0.76□□□□□ -2.29
SGCE-209ENST00000462731 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
SGCE-209ENST00000462731 MT1FP04733 61 aa0.67□□□□□ -2.3
SGCE-209ENST00000462731 MT2AP02795 61 aa0.66□□□□□ -2.3
SGCE-209ENST00000462731 DEFB136Q30KP8 78 aa0.66□□□□□ -2.3
SGCE-209ENST00000462731 COX14Q96I36 57 aa0.66□□□□□ -2.3
SGCE-209ENST00000462731 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
SGCE-209ENST00000462731 A0A096LNI7 61 aa0.63□□□□□ -2.31
SGCE-209ENST00000462731 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
SGCE-209ENST00000462731 DEFB1P60022 68 aa0.6□□□□□ -2.31
SGCE-209ENST00000462731 DEFB4AO15263 64 aa0.59□□□□□ -2.31
SGCE-209ENST00000462731 MT1BP07438 61 aa0.48□□□□□ -2.33
SGCE-209ENST00000462731 HTN3P15516 51 aa0.47□□□□□ -2.33
SGCE-209ENST00000462731 APELAP0DMC3 54 aa0.45□□□□□ -2.34
SGCE-209ENST00000462731 HTN1P15515 57 aa0.45□□□□□ -2.34
SGCE-209ENST00000462731 MT1EP04732 61 aa0.43□□□□□ -2.34
SGCE-209ENST00000462731 RPS29P62273 56 aaKnown RBP0.38□□□□□ -2.35
SGCE-209ENST00000462731 KRTAP19-8Q3LI54 63 aa0.36□□□□□ -2.35
SGCE-209ENST00000462731 A0A096LPF7 62 aa0.35□□□□□ -2.35
SGCE-209ENST00000462731 MT1LQ93083 61 aa0.34□□□□□ -2.36
SGCE-209ENST00000462731 MT1MQ8N339 61 aa0.33□□□□□ -2.36
SGCE-209ENST00000462731 MT1XP80297 61 aa0.32□□□□□ -2.36
SGCE-209ENST00000462731 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
SGCE-209ENST00000462731 LINC01556Q5JQF7 62 aa0.3□□□□□ -2.36
SGCE-209ENST00000462731 MT1GP13640 62 aa0.28□□□□□ -2.36
SGCE-209ENST00000462731 SPRR2GQ9BYE4 73 aa0.26□□□□□ -2.37
SGCE-209ENST00000462731 KRTAP6-1Q3LI64 71 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 60.1 ms