RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MT2AP02795 61 aa3.01□□□□□ -1.93
SMARCC1-204ENST00000462198 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SMARCC1-204ENST00000462198 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
SMARCC1-204ENST00000462198 MT1FP04733 61 aa2.98□□□□□ -1.93
SMARCC1-204ENST00000462198 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
SMARCC1-204ENST00000462198 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
SMARCC1-204ENST00000462198 KMT2DO14686 5537 aa2.92□□□□□ -1.94
SMARCC1-204ENST00000462198 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
SMARCC1-204ENST00000462198 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
SMARCC1-204ENST00000462198 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
SMARCC1-204ENST00000462198 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
SMARCC1-204ENST00000462198 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SMARCC1-204ENST00000462198 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
SMARCC1-204ENST00000462198 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
SMARCC1-204ENST00000462198 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
SMARCC1-204ENST00000462198 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
SMARCC1-204ENST00000462198 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.95
SMARCC1-204ENST00000462198 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
SMARCC1-204ENST00000462198 S4R3F8 94 aa2.82□□□□□ -1.96
SMARCC1-204ENST00000462198 INE1O15225 51 aa2.81□□□□□ -1.96
SMARCC1-204ENST00000462198 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SMARCC1-204ENST00000462198 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
SMARCC1-204ENST00000462198 SPRR2EP22531 72 aa2.75□□□□□ -1.97
SMARCC1-204ENST00000462198 SPRR2BP35325 72 aa2.75□□□□□ -1.97
SMARCC1-204ENST00000462198 SPRR2AP35326 72 aa2.75□□□□□ -1.97
SMARCC1-204ENST00000462198 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
SMARCC1-204ENST00000462198 A0A0D9SG42 100 aa2.73□□□□□ -1.97
SMARCC1-204ENST00000462198 R4GN34 69 aa2.73□□□□□ -1.97
SMARCC1-204ENST00000462198 M0QZ58 72 aa2.71□□□□□ -1.98
SMARCC1-204ENST00000462198 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
SMARCC1-204ENST00000462198 KRTAP12-1P59990 96 aa2.69□□□□□ -1.98
SMARCC1-204ENST00000462198 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
SMARCC1-204ENST00000462198 SPRR2DP22532 72 aa2.66□□□□□ -1.98
SMARCC1-204ENST00000462198 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
SMARCC1-204ENST00000462198 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
SMARCC1-204ENST00000462198 MT1BP07438 61 aa2.63□□□□□ -1.99
SMARCC1-204ENST00000462198 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SMARCC1-204ENST00000462198 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
SMARCC1-204ENST00000462198 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
SMARCC1-204ENST00000462198 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
SMARCC1-204ENST00000462198 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
SMARCC1-204ENST00000462198 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SMARCC1-204ENST00000462198 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
SMARCC1-204ENST00000462198 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SMARCC1-204ENST00000462198 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
SMARCC1-204ENST00000462198 TNP1P09430 55 aa2.42□□□□□ -2.02
SMARCC1-204ENST00000462198 MT1XP80297 61 aa2.42□□□□□ -2.02
SMARCC1-204ENST00000462198 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
SMARCC1-204ENST00000462198 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
SMARCC1-204ENST00000462198 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
SMARCC1-204ENST00000462198 MT4P47944 62 aa2.37□□□□□ -2.03
SMARCC1-204ENST00000462198 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
SMARCC1-204ENST00000462198 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
SMARCC1-204ENST00000462198 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
SMARCC1-204ENST00000462198 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
SMARCC1-204ENST00000462198 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
SMARCC1-204ENST00000462198 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
SMARCC1-204ENST00000462198 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
SMARCC1-204ENST00000462198 MT1EP04732 61 aa2.13□□□□□ -2.07
SMARCC1-204ENST00000462198 MT1GP13640 62 aa2.11□□□□□ -2.07
SMARCC1-204ENST00000462198 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
SMARCC1-204ENST00000462198 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
SMARCC1-204ENST00000462198 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
SMARCC1-204ENST00000462198 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
SMARCC1-204ENST00000462198 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SMARCC1-204ENST00000462198 MT1LQ93083 61 aa2.06□□□□□ -2.08
SMARCC1-204ENST00000462198 MT1MQ8N339 61 aa2.05□□□□□ -2.08
SMARCC1-204ENST00000462198 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
SMARCC1-204ENST00000462198 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
SMARCC1-204ENST00000462198 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SMARCC1-204ENST00000462198 MT1AP04731 61 aa1.77□□□□□ -2.13
SMARCC1-204ENST00000462198 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
SMARCC1-204ENST00000462198 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
SMARCC1-204ENST00000462198 PRM1P04553 51 aa1.64□□□□□ -2.15
SMARCC1-204ENST00000462198 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SMARCC1-204ENST00000462198 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SMARCC1-204ENST00000462198 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SMARCC1-204ENST00000462198 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 144 ms