RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ATP5EP2Q5VTU8 51 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 MUSTN1Q8IVN3 82 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 DMAC1Q96GE9 116 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 SMIM2Q9BVW6 85 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 CNFNQ9BYD5 112 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 LINC00472Q9H8W2 130 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 ORMDL1Q9P0S3 153 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
RFC4-211ENST00000460408 COX7B2Q8TF08 81 aa0.68□□□□□ -2.3
RFC4-211ENST00000460408 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
RFC4-211ENST00000460408 I3L3M4 83 aa0.67□□□□□ -2.3
RFC4-211ENST00000460408 NREPQ16612 68 aa0.67□□□□□ -2.3
RFC4-211ENST00000460408 Q96NJ1 140 aa0.67□□□□□ -2.3
RFC4-211ENST00000460408 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
RFC4-211ENST00000460408 DNAL4O96015 105 aa0.66□□□□□ -2.3
RFC4-211ENST00000460408 POLR2KP53803 58 aaKnown RBP0.66□□□□□ -2.3
RFC4-211ENST00000460408 LINC00208Q96KT6 92 aa0.66□□□□□ -2.3
RFC4-211ENST00000460408 JMJD7-PLA2G4BH0Y9G9 81 aa0.65□□□□□ -2.31
RFC4-211ENST00000460408 H0Y9P7 68 aa0.65□□□□□ -2.31
RFC4-211ENST00000460408 UQCR11O14957 56 aa0.65□□□□□ -2.31
RFC4-211ENST00000460408 RPL39P62891 51 aaKnown RBP0.65□□□□□ -2.31
RFC4-211ENST00000460408 SSBP3-AS1Q7Z2R9 100 aa0.65□□□□□ -2.31
RFC4-211ENST00000460408 TOMM7Q9P0U1 55 aa0.65□□□□□ -2.31
RFC4-211ENST00000460408 MT1BP07438 61 aa0.64□□□□□ -2.31
RFC4-211ENST00000460408 LINC00158P58513 81 aa0.64□□□□□ -2.31
RFC4-211ENST00000460408 Q8IZM0 81 aa0.64□□□□□ -2.31
RFC4-211ENST00000460408 LINC00308Q8TCZ7 52 aa0.64□□□□□ -2.31
RFC4-211ENST00000460408 CDKN2A-AS1Q9UH64 79 aa0.64□□□□□ -2.31
RFC4-211ENST00000460408 H0YGX0 51 aa0.63□□□□□ -2.31
RFC4-211ENST00000460408 SPRR1AP35321 89 aa0.63□□□□□ -2.31
RFC4-211ENST00000460408 COX17Q14061 63 aa0.63□□□□□ -2.31
RFC4-211ENST00000460408 UBL5Q9BZL1 73 aa0.63□□□□□ -2.31
RFC4-211ENST00000460408 ETDCA0A1B0GVM5 59 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 NCR3O14931 201 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 NDUFB1O75438 58 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 COX7BP24311 80 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 SMIM11BQ8TCY0 68 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 KCNQ1DNQ9H478 68 aa0.62□□□□□ -2.31
RFC4-211ENST00000460408 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
RFC4-211ENST00000460408 Q6ZQY7 126 aa0.61□□□□□ -2.31
RFC4-211ENST00000460408 Q6ZRX8 168 aa0.61□□□□□ -2.31
RFC4-211ENST00000460408 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
RFC4-211ENST00000460408 A0A1B0GU69 56 aa0.6□□□□□ -2.31
RFC4-211ENST00000460408 ACYP2P14621 99 aa0.6□□□□□ -2.31
RFC4-211ENST00000460408 SPRR1BP22528 89 aa0.6□□□□□ -2.31
RFC4-211ENST00000460408 LINC00575Q6W349 94 aa0.6□□□□□ -2.31
RFC4-211ENST00000460408 PLAC4Q8WY50 150 aa0.59□□□□□ -2.31
RFC4-211ENST00000460408 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
RFC4-211ENST00000460408 CRIPTQ9P021 101 aa0.59□□□□□ -2.31
RFC4-211ENST00000460408 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
RFC4-211ENST00000460408 H0YAA0 97 aa0.58□□□□□ -2.32
RFC4-211ENST00000460408 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
RFC4-211ENST00000460408 DEFB105AQ8NG35 78 aa0.58□□□□□ -2.32
RFC4-211ENST00000460408 K7EQZ3 153 aa0.57□□□□□ -2.32
RFC4-211ENST00000460408 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
RFC4-211ENST00000460408 TP53AIP1Q9HCN2 124 aa0.57□□□□□ -2.32
RFC4-211ENST00000460408 MMP24-AS1A0A0U1RRL7 71 aa0.56□□□□□ -2.32
RFC4-211ENST00000460408 MT1XP80297 61 aa0.56□□□□□ -2.32
RFC4-211ENST00000460408 C10orf95Q9H7T3 257 aa0.56□□□□□ -2.32
RFC4-211ENST00000460408 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
RFC4-211ENST00000460408 MT1GP13640 62 aa0.55□□□□□ -2.32
RFC4-211ENST00000460408 H1FX-AS1Q4G0G2 97 aa0.55□□□□□ -2.32
RFC4-211ENST00000460408 MRPL34Q9BQ48 92 aaKnown RBP0.55□□□□□ -2.32
RFC4-211ENST00000460408 MT1EP04732 61 aa0.51□□□□□ -2.33
RFC4-211ENST00000460408 KRTAP19-7Q3SYF9 63 aa0.51□□□□□ -2.33
RFC4-211ENST00000460408 MT1MQ8N339 61 aa0.5□□□□□ -2.33
RFC4-211ENST00000460408 S4R3F8 94 aa0.5□□□□□ -2.33
RFC4-211ENST00000460408 KRTAP19-5Q3LI72 72 aa0.46□□□□□ -2.34
RFC4-211ENST00000460408 MT1LQ93083 61 aa0.46□□□□□ -2.34
RFC4-211ENST00000460408 A0A0D9SG42 100 aa0.45□□□□□ -2.34
RFC4-211ENST00000460408 M0QZ58 72 aa0.45□□□□□ -2.34
RFC4-211ENST00000460408 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
RFC4-211ENST00000460408 KRTAP6-2Q3LI66 62 aa0.43□□□□□ -2.34
RFC4-211ENST00000460408 TNP1P09430 55 aa0.41□□□□□ -2.34
RFC4-211ENST00000460408 KRTAP6-1Q3LI64 71 aa0.4□□□□□ -2.35
RFC4-211ENST00000460408 MT1AP04731 61 aa0.39□□□□□ -2.35
RFC4-211ENST00000460408 PRM1P04553 51 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms