RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 UBL5Q9BZL1 73 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 SPRR2DP22532 72 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 Q5VV11 94 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 Q8N9L7 120 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 JMJD7-PLA2G4BH0Y9G9 81 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
NEDD1-204ENST00000457368 LINC00308Q8TCZ7 52 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 Q96NJ1 140 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 SPRR2GQ9BYE4 73 aa0.96□□□□□ -2.26
NEDD1-204ENST00000457368 H0YGX0 51 aa0.95□□□□□ -2.26
NEDD1-204ENST00000457368 PRR15LQ9BU68 103 aa0.94□□□□□ -2.26
NEDD1-204ENST00000457368 COX7BP24311 80 aa0.94□□□□□ -2.26
NEDD1-204ENST00000457368 SMIM11BQ8TCY0 68 aa0.94□□□□□ -2.26
NEDD1-204ENST00000457368 LOC110117498A0A087WWA1 95 aa0.93□□□□□ -2.26
NEDD1-204ENST00000457368 LOC101927531A0A1B0GV80 90 aa0.93□□□□□ -2.26
NEDD1-204ENST00000457368 PDE6GP18545 87 aa0.93□□□□□ -2.26
NEDD1-204ENST00000457368 ZCCHC13Q8WW36 166 aaKnown RBP0.92□□□□□ -2.26
NEDD1-204ENST00000457368 IGKV4-1P06312 121 aa0.92□□□□□ -2.26
NEDD1-204ENST00000457368 NDUFB1O75438 58 aa0.92□□□□□ -2.26
NEDD1-204ENST00000457368 KRTAP8-1Q8IUC2 63 aa0.92□□□□□ -2.26
NEDD1-204ENST00000457368 DEFB105AQ8NG35 78 aa0.92□□□□□ -2.26
NEDD1-204ENST00000457368 LINC00208Q96KT6 92 aa0.92□□□□□ -2.26
NEDD1-204ENST00000457368 H1FX-AS1Q4G0G2 97 aa0.91□□□□□ -2.26
NEDD1-204ENST00000457368 SPINK7P58062 85 aa0.91□□□□□ -2.26
NEDD1-204ENST00000457368 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.26
NEDD1-204ENST00000457368 UQCR11O14957 56 aa0.9□□□□□ -2.27
NEDD1-204ENST00000457368 LINC00575Q6W349 94 aa0.9□□□□□ -2.27
NEDD1-204ENST00000457368 COA5Q86WW8 74 aa0.9□□□□□ -2.27
NEDD1-204ENST00000457368 WFDC13Q8IUB5 93 aa0.89□□□□□ -2.27
NEDD1-204ENST00000457368 Q6ZQY7 126 aa0.89□□□□□ -2.27
NEDD1-204ENST00000457368 CRIPTQ9P021 101 aa0.89□□□□□ -2.27
NEDD1-204ENST00000457368 H0Y9P7 68 aa0.88□□□□□ -2.27
NEDD1-204ENST00000457368 INE1O15225 51 aa0.88□□□□□ -2.27
NEDD1-204ENST00000457368 MT1XP80297 61 aa0.88□□□□□ -2.27
NEDD1-204ENST00000457368 PP632Q6XCG6 107 aa0.88□□□□□ -2.27
NEDD1-204ENST00000457368 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
NEDD1-204ENST00000457368 K7EQZ3 153 aa0.87□□□□□ -2.27
NEDD1-204ENST00000457368 LCE3DQ9BYE3 92 aa0.87□□□□□ -2.27
NEDD1-204ENST00000457368 ACYP2P14621 99 aa0.86□□□□□ -2.27
NEDD1-204ENST00000457368 LCE1CQ5T751 118 aa0.86□□□□□ -2.27
NEDD1-204ENST00000457368 LCE1BQ5T7P3 118 aa0.86□□□□□ -2.27
NEDD1-204ENST00000457368 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
NEDD1-204ENST00000457368 A0A1B0GU69 56 aa0.84□□□□□ -2.28
NEDD1-204ENST00000457368 DSTQ03001 7570 aaKnown RBP0.83□□□□□ -2.28
NEDD1-204ENST00000457368 H0YAA0 97 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 MT4P47944 62 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 TP53AIP1Q9HCN2 124 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 PLAC4Q8WY50 150 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 S4R3F8 94 aa0.82□□□□□ -2.28
NEDD1-204ENST00000457368 MT1EP04732 61 aa0.8□□□□□ -2.28
NEDD1-204ENST00000457368 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
NEDD1-204ENST00000457368 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
NEDD1-204ENST00000457368 MT1GP13640 62 aa0.79□□□□□ -2.28
NEDD1-204ENST00000457368 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
NEDD1-204ENST00000457368 KRTAP13-4Q3LI77 160 aa0.78□□□□□ -2.28
NEDD1-204ENST00000457368 MT1MQ8N339 61 aa0.76□□□□□ -2.29
NEDD1-204ENST00000457368 C10orf95Q9H7T3 257 aa0.75□□□□□ -2.29
NEDD1-204ENST00000457368 KRTAP12-1P59990 96 aa0.73□□□□□ -2.29
NEDD1-204ENST00000457368 KRTAP12-4P60329 112 aa0.73□□□□□ -2.29
NEDD1-204ENST00000457368 MT1LQ93083 61 aa0.73□□□□□ -2.29
NEDD1-204ENST00000457368 M0QZ58 72 aa0.71□□□□□ -2.3
NEDD1-204ENST00000457368 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
NEDD1-204ENST00000457368 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
NEDD1-204ENST00000457368 A0A0D9SG42 100 aa0.69□□□□□ -2.3
NEDD1-204ENST00000457368 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
NEDD1-204ENST00000457368 MT1AP04731 61 aa0.63□□□□□ -2.31
NEDD1-204ENST00000457368 KRTAP12-3P60328 96 aa0.62□□□□□ -2.31
NEDD1-204ENST00000457368 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
NEDD1-204ENST00000457368 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
NEDD1-204ENST00000457368 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
NEDD1-204ENST00000457368 TNP1P09430 55 aa0.58□□□□□ -2.32
NEDD1-204ENST00000457368 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
NEDD1-204ENST00000457368 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
NEDD1-204ENST00000457368 PRM1P04553 51 aa0.43□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms