RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 Q1T7F1 81 aa2.77□□□□□ -1.97
LINC01961-201ENST00000449954 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
LINC01961-201ENST00000449954 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
LINC01961-201ENST00000449954 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
LINC01961-201ENST00000449954 PRO1854Q9UHT4 67 aa2.77□□□□□ -1.97
LINC01961-201ENST00000449954 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
LINC01961-201ENST00000449954 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
LINC01961-201ENST00000449954 BPY2O14599 106 aa2.75□□□□□ -1.97
LINC01961-201ENST00000449954 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
LINC01961-201ENST00000449954 COX8AP10176 69 aa2.75□□□□□ -1.97
LINC01961-201ENST00000449954 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
LINC01961-201ENST00000449954 HIGD1BQ9P298 99 aa2.74□□□□□ -1.97
LINC01961-201ENST00000449954 LOC110117498A0A087WWA1 95 aa2.73□□□□□ -1.97
LINC01961-201ENST00000449954 COX6CP09669 75 aa2.73□□□□□ -1.97
LINC01961-201ENST00000449954 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
LINC01961-201ENST00000449954 H7BZZ5 65 aa2.71□□□□□ -1.98
LINC01961-201ENST00000449954 K7ERS5 55 aa2.71□□□□□ -1.98
LINC01961-201ENST00000449954 P0C880 135 aa2.71□□□□□ -1.98
LINC01961-201ENST00000449954 JMJD7-PLA2G4BH0Y9G9 81 aa2.7□□□□□ -1.98
LINC01961-201ENST00000449954 ROMO1P60602 79 aa2.7□□□□□ -1.98
LINC01961-201ENST00000449954 MT1LQ93083 61 aa2.7□□□□□ -1.98
LINC01961-201ENST00000449954 ACYP1P07311 99 aa2.68□□□□□ -1.98
LINC01961-201ENST00000449954 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
LINC01961-201ENST00000449954 LINC00643Q86TS7 51 aa2.68□□□□□ -1.98
LINC01961-201ENST00000449954 A6NED7 52 aa2.67□□□□□ -1.98
LINC01961-201ENST00000449954 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
LINC01961-201ENST00000449954 FXYD2P54710 66 aa2.64□□□□□ -1.99
LINC01961-201ENST00000449954 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
LINC01961-201ENST00000449954 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
LINC01961-201ENST00000449954 Q8N9L7 120 aa2.64□□□□□ -1.99
LINC01961-201ENST00000449954 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
LINC01961-201ENST00000449954 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
LINC01961-201ENST00000449954 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
LINC01961-201ENST00000449954 SPANXA2-OT1Q8N9U9 137 aa2.63□□□□□ -1.99
LINC01961-201ENST00000449954 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
LINC01961-201ENST00000449954 C14orf132Q9NPU4 83 aa2.63□□□□□ -1.99
LINC01961-201ENST00000449954 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
LINC01961-201ENST00000449954 TRAV22A0A0B4J277 110 aa2.6□□□□□ -1.99
LINC01961-201ENST00000449954 H3BPC8 53 aa2.58□□□□□ -2
LINC01961-201ENST00000449954 ATXN8Q156A1 80 aa2.58□□□□□ -2
LINC01961-201ENST00000449954 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
LINC01961-201ENST00000449954 A0A0D9SG42 100 aa2.57□□□□□ -2
LINC01961-201ENST00000449954 LOC101927531A0A1B0GV80 90 aa2.57□□□□□ -2
LINC01961-201ENST00000449954 MIR22HGQ0VDD5 57 aa2.56□□□□□ -2
LINC01961-201ENST00000449954 A0A1B0GU33 70 aa2.54□□□□□ -2
LINC01961-201ENST00000449954 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
LINC01961-201ENST00000449954 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
LINC01961-201ENST00000449954 ATP5EP2Q5VTU8 51 aa2.47□□□□□ -2.01
LINC01961-201ENST00000449954 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
LINC01961-201ENST00000449954 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
LINC01961-201ENST00000449954 DMAC1Q96GE9 116 aa2.42□□□□□ -2.02
LINC01961-201ENST00000449954 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
LINC01961-201ENST00000449954 PRR15LQ9BU68 103 aa2.4□□□□□ -2.03
LINC01961-201ENST00000449954 UBL5Q9BZL1 73 aa2.4□□□□□ -2.03
LINC01961-201ENST00000449954 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
LINC01961-201ENST00000449954 H0Y9P7 68 aa2.35□□□□□ -2.03
LINC01961-201ENST00000449954 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
LINC01961-201ENST00000449954 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
LINC01961-201ENST00000449954 MT1AP04731 61 aa2.3□□□□□ -2.04
LINC01961-201ENST00000449954 SPINT4Q6UDR6 99 aa2.3□□□□□ -2.04
LINC01961-201ENST00000449954 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
LINC01961-201ENST00000449954 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
LINC01961-201ENST00000449954 UQCR11O14957 56 aa2.28□□□□□ -2.04
LINC01961-201ENST00000449954 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
LINC01961-201ENST00000449954 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
LINC01961-201ENST00000449954 TNP1P09430 55 aa2.21□□□□□ -2.06
LINC01961-201ENST00000449954 INE1O15225 51 aa2.17□□□□□ -2.06
LINC01961-201ENST00000449954 COA5Q86WW8 74 aa2.17□□□□□ -2.06
LINC01961-201ENST00000449954 ACYP2P14621 99 aa2.13□□□□□ -2.07
LINC01961-201ENST00000449954 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
LINC01961-201ENST00000449954 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
LINC01961-201ENST00000449954 A0A1B0GU69 56 aa2.1□□□□□ -2.07
LINC01961-201ENST00000449954 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
LINC01961-201ENST00000449954 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
LINC01961-201ENST00000449954 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
LINC01961-201ENST00000449954 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
LINC01961-201ENST00000449954 PRM1P04553 51 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms