RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PRO1933Q9H354 126 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 KCNQ1DNQ9H478 68 aa0.49□□□□□ -2.33
TRAPPC13-204ENST00000438419 ETDCA0A1B0GVM5 59 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 hADV29S1A0JD25 119 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 H3BUT2 72 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 ACYP1P07311 99 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 COX7BP24311 80 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 CLPSL2Q6UWE3 100 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 Q6ZRX8 168 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 SNHG12Q9BXW3 62 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 C6orf48Q9UBA6 75 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPCS1Q9Y6A9 102 aa0.48□□□□□ -2.33
TRAPPC13-204ENST00000438419 F8WEM9 126 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 K7EP34 96 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 BCE1O60756 84 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPRR1BP22528 89 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPRR1AP35321 89 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 Q6JHZ5 121 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPAG11AQ6PDA7 123 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 IGLV5-48A0A075B6I7 105 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 A0A096LNI7 61 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 TRAV22A0A0B4J277 110 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 TRBV7-4A0A0J9YYF1 115 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 SPINK1P00995 79 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 RPS29P62273 56 aaKnown RBP0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 ETDBQ3ZM63 59 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 ATP5EP2Q5VTU8 51 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
TRAPPC13-204ENST00000438419 TRBV7-7A0A0K0K1E9 115 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 CHKB-CPT1BH3BT56 60 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 NDUFB1O75438 58 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 PRLHP81277 87 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 NREPQ16612 68 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 LINC00643Q86TS7 51 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 SPRR4Q96PI1 79 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 LINC01558Q9Y6Z2 57 aa0.46□□□□□ -2.34
TRAPPC13-204ENST00000438419 UQCR11O14957 56 aa0.45□□□□□ -2.34
TRAPPC13-204ENST00000438419 MT-ATP8P03928 68 aa0.45□□□□□ -2.34
TRAPPC13-204ENST00000438419 LINC00472Q9H8W2 130 aa0.45□□□□□ -2.34
TRAPPC13-204ENST00000438419 TP53AIP1Q9HCN2 124 aa0.45□□□□□ -2.34
TRAPPC13-204ENST00000438419 ATOX1O00244 68 aa0.44□□□□□ -2.34
TRAPPC13-204ENST00000438419 NDUFC1O43677 76 aa0.44□□□□□ -2.34
TRAPPC13-204ENST00000438419 WFDC13Q8IUB5 93 aa0.43□□□□□ -2.34
TRAPPC13-204ENST00000438419 SERP2Q8N6R1 65 aa0.43□□□□□ -2.34
TRAPPC13-204ENST00000438419 MRPL34Q9BQ48 92 aaKnown RBP0.43□□□□□ -2.34
TRAPPC13-204ENST00000438419 K7EQZ3 153 aa0.42□□□□□ -2.34
TRAPPC13-204ENST00000438419 MT1BP07438 61 aa0.42□□□□□ -2.34
TRAPPC13-204ENST00000438419 A0A087WVE0 104 aa0.41□□□□□ -2.34
TRAPPC13-204ENST00000438419 MMP24-AS1A0A0U1RRL7 71 aa0.41□□□□□ -2.34
TRAPPC13-204ENST00000438419 H0Y9P7 68 aa0.41□□□□□ -2.34
TRAPPC13-204ENST00000438419 C9orf92A6NGG3 77 aa0.4□□□□□ -2.34
TRAPPC13-204ENST00000438419 H7BZZ5 65 aa0.4□□□□□ -2.34
TRAPPC13-204ENST00000438419 H1FX-AS1Q4G0G2 97 aa0.39□□□□□ -2.35
TRAPPC13-204ENST00000438419 H0YAA0 97 aa0.38□□□□□ -2.35
TRAPPC13-204ENST00000438419 M0QZ58 72 aa0.38□□□□□ -2.35
TRAPPC13-204ENST00000438419 CRIPTQ9P021 101 aa0.38□□□□□ -2.35
TRAPPC13-204ENST00000438419 A0A1B0GU69 56 aa0.38□□□□□ -2.35
TRAPPC13-204ENST00000438419 S4R3F8 94 aa0.38□□□□□ -2.35
TRAPPC13-204ENST00000438419 KRTAP19-8Q3LI54 63 aa0.36□□□□□ -2.35
TRAPPC13-204ENST00000438419 SPRR2GQ9BYE4 73 aa0.34□□□□□ -2.36
TRAPPC13-204ENST00000438419 TNP1P09430 55 aa0.33□□□□□ -2.36
TRAPPC13-204ENST00000438419 MT1XP80297 61 aa0.32□□□□□ -2.36
TRAPPC13-204ENST00000438419 MT1GP13640 62 aa0.31□□□□□ -2.36
TRAPPC13-204ENST00000438419 MT1MQ8N339 61 aa0.31□□□□□ -2.36
TRAPPC13-204ENST00000438419 MT1EP04732 61 aa0.3□□□□□ -2.36
TRAPPC13-204ENST00000438419 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
TRAPPC13-204ENST00000438419 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.37
TRAPPC13-204ENST00000438419 KRTAP19-5Q3LI72 72 aa0.27□□□□□ -2.37
TRAPPC13-204ENST00000438419 MT1LQ93083 61 aa0.27□□□□□ -2.37
TRAPPC13-204ENST00000438419 MT1AP04731 61 aa0.22□□□□□ -2.37
TRAPPC13-204ENST00000438419 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
TRAPPC13-204ENST00000438419 PRM1P04553 51 aa0.15□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms