RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
LINC01239-202ENST00000436786 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
LINC01239-202ENST00000436786 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
LINC01239-202ENST00000436786 KRTAP10-12P60413 245 aa1.97□□□□□ -2.09
LINC01239-202ENST00000436786 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
LINC01239-202ENST00000436786 S4R3F8 94 aa1.96□□□□□ -2.1
LINC01239-202ENST00000436786 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
LINC01239-202ENST00000436786 UQCR11O14957 56 aa1.96□□□□□ -2.1
LINC01239-202ENST00000436786 A0A1B0GU69 56 aa1.95□□□□□ -2.1
LINC01239-202ENST00000436786 K7ERS5 55 aa1.95□□□□□ -2.1
LINC01239-202ENST00000436786 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
LINC01239-202ENST00000436786 DMAC1Q96GE9 116 aa1.92□□□□□ -2.1
LINC01239-202ENST00000436786 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
LINC01239-202ENST00000436786 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
LINC01239-202ENST00000436786 KMT2DO14686 5537 aa1.91□□□□□ -2.1
LINC01239-202ENST00000436786 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
LINC01239-202ENST00000436786 ACYP2P14621 99 aa1.9□□□□□ -2.1
LINC01239-202ENST00000436786 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
LINC01239-202ENST00000436786 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
LINC01239-202ENST00000436786 TP53AIP1Q9HCN2 124 aa1.89□□□□□ -2.11
LINC01239-202ENST00000436786 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
LINC01239-202ENST00000436786 SPRR2EP22531 72 aa1.88□□□□□ -2.11
LINC01239-202ENST00000436786 SPRR2BP35325 72 aa1.88□□□□□ -2.11
LINC01239-202ENST00000436786 SPRR2AP35326 72 aa1.88□□□□□ -2.11
LINC01239-202ENST00000436786 MT1XP80297 61 aa1.86□□□□□ -2.11
LINC01239-202ENST00000436786 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
LINC01239-202ENST00000436786 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
LINC01239-202ENST00000436786 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
LINC01239-202ENST00000436786 H0YAA0 97 aa1.84□□□□□ -2.11
LINC01239-202ENST00000436786 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
LINC01239-202ENST00000436786 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
LINC01239-202ENST00000436786 SPRR2DP22532 72 aa1.82□□□□□ -2.12
LINC01239-202ENST00000436786 KRTAP12-2P59991 146 aa1.82□□□□□ -2.12
LINC01239-202ENST00000436786 CAMK2N1Q7Z7J9 78 aa1.82□□□□□ -2.12
LINC01239-202ENST00000436786 R4GN34 69 aa1.79□□□□□ -2.12
LINC01239-202ENST00000436786 M0QZ58 72 aa1.78□□□□□ -2.13
LINC01239-202ENST00000436786 A0A1B0GU33 70 aa1.76□□□□□ -2.13
LINC01239-202ENST00000436786 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
LINC01239-202ENST00000436786 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
LINC01239-202ENST00000436786 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
LINC01239-202ENST00000436786 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
LINC01239-202ENST00000436786 KRTAP19-7Q3SYF9 63 aa1.66□□□□□ -2.14
LINC01239-202ENST00000436786 MT1EP04732 61 aa1.65□□□□□ -2.15
LINC01239-202ENST00000436786 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.15
LINC01239-202ENST00000436786 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
LINC01239-202ENST00000436786 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
LINC01239-202ENST00000436786 A0A0D9SG42 100 aa1.62□□□□□ -2.15
LINC01239-202ENST00000436786 MT4P47944 62 aa1.61□□□□□ -2.15
LINC01239-202ENST00000436786 MT1GP13640 62 aa1.6□□□□□ -2.15
LINC01239-202ENST00000436786 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
LINC01239-202ENST00000436786 PP632Q6XCG6 107 aa1.58□□□□□ -2.16
LINC01239-202ENST00000436786 MT1MQ8N339 61 aa1.58□□□□□ -2.16
LINC01239-202ENST00000436786 INE1O15225 51 aa1.57□□□□□ -2.16
LINC01239-202ENST00000436786 MT1LQ93083 61 aa1.56□□□□□ -2.16
LINC01239-202ENST00000436786 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
LINC01239-202ENST00000436786 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
LINC01239-202ENST00000436786 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
LINC01239-202ENST00000436786 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
LINC01239-202ENST00000436786 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
LINC01239-202ENST00000436786 SPRR5A0A1B0GTR4 108 aa1.48□□□□□ -2.17
LINC01239-202ENST00000436786 TNP1P09430 55 aa1.48□□□□□ -2.17
LINC01239-202ENST00000436786 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
LINC01239-202ENST00000436786 LCE3CQ5T5A8 94 aa1.46□□□□□ -2.18
LINC01239-202ENST00000436786 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
LINC01239-202ENST00000436786 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
LINC01239-202ENST00000436786 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
LINC01239-202ENST00000436786 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
LINC01239-202ENST00000436786 MT1AP04731 61 aa1.32□□□□□ -2.2
LINC01239-202ENST00000436786 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
LINC01239-202ENST00000436786 LCE3EQ5T5B0 92 aa1.31□□□□□ -2.2
LINC01239-202ENST00000436786 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
LINC01239-202ENST00000436786 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
LINC01239-202ENST00000436786 PRM1P04553 51 aa0.98□□□□□ -2.25
LINC01239-202ENST00000436786 LCE3DQ9BYE3 92 aa0.94□□□□□ -2.26
LINC01239-202ENST00000436786 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
LINC01239-202ENST00000436786 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
LINC01239-202ENST00000436786 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 115.5 ms