RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 APELAP0DMC3 54 aa0.43□□□□□ -2.34
SF3B1-205ENST00000424674 HTN1P15515 57 aa0.43□□□□□ -2.34
SF3B1-205ENST00000424674 BRCA2P51587 3418 aa0.43□□□□□ -2.34
SF3B1-205ENST00000424674 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
SF3B1-205ENST00000424674 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 NBEAL1Q6ZS30 2694 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 XIRP2A4UGR9 3374 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 ASPMQ8IZT6 3477 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 HMCN2Q8NDA2 5059 aa0.42□□□□□ -2.34
SF3B1-205ENST00000424674 MAP1AP78559 2803 aaPredicted RBP0.42□□□□□ -2.34
SF3B1-205ENST00000424674 TEX15Q9BXT5 2789 aa0.41□□□□□ -2.34
SF3B1-205ENST00000424674 PKHD1P08F94 4074 aa0.41□□□□□ -2.34
SF3B1-205ENST00000424674 DEFB133Q30KQ1 61 aa0.41□□□□□ -2.34
SF3B1-205ENST00000424674 UNC80Q8N2C7 3258 aa0.41□□□□□ -2.34
SF3B1-205ENST00000424674 FREM2Q5SZK8 3169 aa0.4□□□□□ -2.35
SF3B1-205ENST00000424674 DCHS1Q96JQ0 3298 aa0.4□□□□□ -2.35
SF3B1-205ENST00000424674 DNHD1Q96M86 4753 aa0.4□□□□□ -2.35
SF3B1-205ENST00000424674 SVEP1Q4LDE5 3571 aa0.39□□□□□ -2.35
SF3B1-205ENST00000424674 DMDP11532 3685 aa0.39□□□□□ -2.35
SF3B1-205ENST00000424674 SPTAN1Q13813 2472 aaKnown RBP0.39□□□□□ -2.35
SF3B1-205ENST00000424674 RPS29P62273 56 aaKnown RBP0.39□□□□□ -2.35
SF3B1-205ENST00000424674 TLN1Q9Y490 2541 aaKnown RBP0.39□□□□□ -2.35
SF3B1-205ENST00000424674 ITPR2Q14571 2701 aa0.39□□□□□ -2.35
SF3B1-205ENST00000424674 CEP295Q9C0D2 2601 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 CENPFP49454 3210 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 MGAM2Q2M2H8 2515 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 ADGRG4Q8IZF6 3080 aa0.38□□□□□ -2.35
SF3B1-205ENST00000424674 CSMD2Q7Z408 3487 aa0.37□□□□□ -2.35
SF3B1-205ENST00000424674 PLECQ15149 4684 aaKnown RBP0.36□□□□□ -2.35
SF3B1-205ENST00000424674 MT1HP80294 61 aa0.36□□□□□ -2.35
SF3B1-205ENST00000424674 LAMA1P25391 3075 aa0.36□□□□□ -2.35
SF3B1-205ENST00000424674 CENPEQ02224 2701 aa0.35□□□□□ -2.35
SF3B1-205ENST00000424674 MT1EP04732 61 aa0.34□□□□□ -2.36
SF3B1-205ENST00000424674 HERC2O95714 4834 aa0.34□□□□□ -2.36
SF3B1-205ENST00000424674 WDFY3Q8IZQ1 3526 aa0.34□□□□□ -2.36
SF3B1-205ENST00000424674 DNAH14Q0VDD8 3507 aa0.33□□□□□ -2.36
SF3B1-205ENST00000424674 MUC12Q9UKN1 5478 aa0.33□□□□□ -2.36
SF3B1-205ENST00000424674 VPS13CQ709C8 3753 aa0.33□□□□□ -2.36
SF3B1-205ENST00000424674 UTRNP46939 3433 aa0.33□□□□□ -2.36
SF3B1-205ENST00000424674 VPS13AQ96RL7 3174 aa0.33□□□□□ -2.36
SF3B1-205ENST00000424674 LRP2P98164 4655 aa0.32□□□□□ -2.36
SF3B1-205ENST00000424674 CD52P31358 61 aa0.32□□□□□ -2.36
SF3B1-205ENST00000424674 DNAH5Q8TE73 4624 aa0.32□□□□□ -2.36
SF3B1-205ENST00000424674 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
SF3B1-205ENST00000424674 DYNC1H1Q14204 4646 aaKnown RBP0.31□□□□□ -2.36
SF3B1-205ENST00000424674 MYO15AQ9UKN7 3530 aa0.3□□□□□ -2.36
SF3B1-205ENST00000424674 USH2AO75445 5202 aa0.3□□□□□ -2.36
SF3B1-205ENST00000424674 Q9Y3F1 56 aa0.3□□□□□ -2.36
SF3B1-205ENST00000424674 MT1LQ93083 61 aa0.29□□□□□ -2.36
SF3B1-205ENST00000424674 LINC01556Q5JQF7 62 aa0.28□□□□□ -2.36
SF3B1-205ENST00000424674 GOLGB1Q14789 3259 aaKnown RBP0.28□□□□□ -2.37
SF3B1-205ENST00000424674 COX14Q96I36 57 aa0.27□□□□□ -2.37
SF3B1-205ENST00000424674 MUC17Q685J3 4493 aa0.27□□□□□ -2.37
SF3B1-205ENST00000424674 STARD9Q9P2P6 4700 aa0.27□□□□□ -2.37
SF3B1-205ENST00000424674 CDH23Q9H251 3354 aa0.24□□□□□ -2.37
SF3B1-205ENST00000424674 A0A096LPF7 62 aa0.24□□□□□ -2.37
SF3B1-205ENST00000424674 STATHP02808 62 aa0.23□□□□□ -2.37
SF3B1-205ENST00000424674 DEFB4AO15263 64 aa0.22□□□□□ -2.37
SF3B1-205ENST00000424674 MT1XP80297 61 aa0.21□□□□□ -2.38
SF3B1-205ENST00000424674 SPRR2GQ9BYE4 73 aa0.21□□□□□ -2.38
SF3B1-205ENST00000424674 DEFB108BQ8NET1 73 aa0.2□□□□□ -2.38
SF3B1-205ENST00000424674 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
SF3B1-205ENST00000424674 MT4P47944 62 aa0.16□□□□□ -2.38
SF3B1-205ENST00000424674 KRTAP19-7Q3SYF9 63 aa0.14□□□□□ -2.39
SF3B1-205ENST00000424674 KRTAP19-8Q3LI54 63 aa0.11□□□□□ -2.39
SF3B1-205ENST00000424674 HTN3P15516 51 aa0.1□□□□□ -2.39
SF3B1-205ENST00000424674 MT1MQ8N339 61 aa0.08□□□□□ -2.4
SF3B1-205ENST00000424674 MT2AP02795 61 aa0.07□□□□□ -2.4
SF3B1-205ENST00000424674 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
SF3B1-205ENST00000424674 MT1GP13640 62 aa0.06□□□□□ -2.4
SF3B1-205ENST00000424674 MT1HL1P0DM35 61 aa0.05□□□□□ -2.4
SF3B1-205ENST00000424674 MT1FP04733 61 aa0.01□□□□□ -2.41
SF3B1-205ENST00000424674 MT1BP07438 61 aa0.01□□□□□ -2.41
SF3B1-205ENST00000424674 KRTAP19-2Q3LHN2 52 aa0.01□□□□□ -2.41
SF3B1-205ENST00000424674 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms