RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 NREPQ16612 68 aa0.27□□□□□ -2.37
TRPS1-204ENST00000422939 LINC01556Q5JQF7 62 aa0.27□□□□□ -2.37
TRPS1-204ENST00000422939 TTTY10Q9BZA0 68 aa0.27□□□□□ -2.37
TRPS1-204ENST00000422939 IFI6P09912 130 aa0.26□□□□□ -2.37
TRPS1-204ENST00000422939 C18orf32Q8TCD1 76 aa0.26□□□□□ -2.37
TRPS1-204ENST00000422939 NDUFA3O95167 84 aa0.25□□□□□ -2.37
TRPS1-204ENST00000422939 KRTAP6-1Q3LI64 71 aa0.25□□□□□ -2.37
TRPS1-204ENST00000422939 NCBP2-AS2Q69YL0 99 aa0.25□□□□□ -2.37
TRPS1-204ENST00000422939 A0A096LNI7 61 aa0.24□□□□□ -2.37
TRPS1-204ENST00000422939 NDUFA4O00483 81 aa0.23□□□□□ -2.37
TRPS1-204ENST00000422939 C3orf79P0CE67 100 aa0.23□□□□□ -2.37
TRPS1-204ENST00000422939 DEFB1P60022 68 aa0.22□□□□□ -2.37
TRPS1-204ENST00000422939 MT1LQ93083 61 aa0.22□□□□□ -2.37
TRPS1-204ENST00000422939 H3BUA1 57 aa0.21□□□□□ -2.38
TRPS1-204ENST00000422939 NOP10Q9NPE3 64 aaKnown RBP0.19□□□□□ -2.38
TRPS1-204ENST00000422939 RHPN1-AS1Q9BWJ2 59 aa0.17□□□□□ -2.38
TRPS1-204ENST00000422939 H3BVH4 76 aa0.16□□□□□ -2.38
TRPS1-204ENST00000422939 LINC00158P58513 81 aa0.16□□□□□ -2.38
TRPS1-204ENST00000422939 RPS29P62273 56 aaKnown RBP0.16□□□□□ -2.38
TRPS1-204ENST00000422939 TIMM8BQ9Y5J9 83 aaPredicted RBP0.16□□□□□ -2.38
TRPS1-204ENST00000422939 MT1AP04731 61 aa0.15□□□□□ -2.39
TRPS1-204ENST00000422939 SMCO4Q9NRQ5 59 aa0.14□□□□□ -2.39
TRPS1-204ENST00000422939 KRTAP19-5Q3LI72 72 aa0.13□□□□□ -2.39
TRPS1-204ENST00000422939 ENHOQ6UWT2 76 aa0.13□□□□□ -2.39
TRPS1-204ENST00000422939 UBL5Q9BZL1 73 aa0.13□□□□□ -2.39
TRPS1-204ENST00000422939 PDCD5O14737 125 aa0.11□□□□□ -2.39
TRPS1-204ENST00000422939 HTN1P15515 57 aa0.11□□□□□ -2.39
TRPS1-204ENST00000422939 A8MTW9 85 aa0.09□□□□□ -2.4
TRPS1-204ENST00000422939 SFTA3P0C7M3 94 aa0.09□□□□□ -2.4
TRPS1-204ENST00000422939 ATXN8Q156A1 80 aa0.08□□□□□ -2.4
TRPS1-204ENST00000422939 KCNQ1DNQ9H478 68 aa0.07□□□□□ -2.4
TRPS1-204ENST00000422939 TMEM167AQ8TBQ9 72 aa0.06□□□□□ -2.4
TRPS1-204ENST00000422939 GNG13Q9P2W3 67 aa0.05□□□□□ -2.4
TRPS1-204ENST00000422939 CLPSL2Q6UWE3 100 aa0.04□□□□□ -2.4
TRPS1-204ENST00000422939 RPL39P5Q59GN2 51 aa0.03□□□□□ -2.4
TRPS1-204ENST00000422939 IAPPP10997 89 aa0.01□□□□□ -2.41
TRPS1-204ENST00000422939 RPS27P42677 84 aaKnown RBP0.01□□□□□ -2.41
TRPS1-204ENST00000422939 PRCDQ00LT1 54 aa0.01□□□□□ -2.41
TRPS1-204ENST00000422939 ETDCA0A1B0GVM5 59 aa0□□□□□ -2.41
TRPS1-204ENST00000422939 K7EIM0 57 aa-0.01□□□□□ -2.41
TRPS1-204ENST00000422939 PRLHP81277 87 aa-0.04□□□□□ -2.42
TRPS1-204ENST00000422939 CRIP1P50238 77 aa-0.06□□□□□ -2.42
TRPS1-204ENST00000422939 WT1-ASQ06250 92 aa-0.07□□□□□ -2.42
TRPS1-204ENST00000422939 A0A087WWC5 75 aa-0.08□□□□□ -2.42
TRPS1-204ENST00000422939 K7EMI3 77 aa-0.09□□□□□ -2.42
TRPS1-204ENST00000422939 IGIPA6NJ69 53 aa-0.12□□□□□ -2.43
TRPS1-204ENST00000422939 SERF2P84101 59 aa-0.12□□□□□ -2.43
TRPS1-204ENST00000422939 S4R3F8 94 aa-0.12□□□□□ -2.43
TRPS1-204ENST00000422939 IGLV5-48A0A075B6I7 105 aa-0.13□□□□□ -2.43
TRPS1-204ENST00000422939 MMP24-AS1A0A0U1RRL7 71 aa-0.13□□□□□ -2.43
TRPS1-204ENST00000422939 LINC01546A6NGU7 62 aa-0.13□□□□□ -2.43
TRPS1-204ENST00000422939 M0QZ58 72 aa-0.13□□□□□ -2.43
TRPS1-204ENST00000422939 TNP1P09430 55 aa-0.13□□□□□ -2.43
TRPS1-204ENST00000422939 SMIM31A0A1B0GVY4 71 aa-0.14□□□□□ -2.43
TRPS1-204ENST00000422939 LINC01549A6NIU2 74 aa-0.14□□□□□ -2.43
TRPS1-204ENST00000422939 TMEM167BQ9NRX6 74 aa-0.14□□□□□ -2.43
TRPS1-204ENST00000422939 C6orf48Q9UBA6 75 aa-0.15□□□□□ -2.43
TRPS1-204ENST00000422939 H0YGX0 51 aa-0.16□□□□□ -2.44
TRPS1-204ENST00000422939 M0QY20 66 aa-0.16□□□□□ -2.44
TRPS1-204ENST00000422939 NMES1Q9C002 83 aa-0.16□□□□□ -2.44
TRPS1-204ENST00000422939 CMC2Q9NRP2 79 aa-0.17□□□□□ -2.44
TRPS1-204ENST00000422939 PLNP26678 52 aa-0.18□□□□□ -2.44
TRPS1-204ENST00000422939 LINC01590Q5TEZ4 76 aa-0.18□□□□□ -2.44
TRPS1-204ENST00000422939 S100ZQ8WXG8 99 aa-0.18□□□□□ -2.44
TRPS1-204ENST00000422939 LINC00308Q8TCZ7 52 aa-0.19□□□□□ -2.44
TRPS1-204ENST00000422939 SMIM27A0A1W2PRY6 76 aa-0.2□□□□□ -2.44
TRPS1-204ENST00000422939 SNRPGP15A8MWD9 76 aa-0.2□□□□□ -2.44
TRPS1-204ENST00000422939 FCER1GP30273 86 aa-0.2□□□□□ -2.44
TRPS1-204ENST00000422939 SMIM2Q9BVW6 85 aa-0.2□□□□□ -2.44
TRPS1-204ENST00000422939 NDUFA1O15239 70 aa-0.21□□□□□ -2.44
TRPS1-204ENST00000422939 SNRPGP62308 76 aaKnown RBP-0.21□□□□□ -2.44
TRPS1-204ENST00000422939 ARHGAP5-AS1Q96IT6 56 aa-0.23□□□□□ -2.45
TRPS1-204ENST00000422939 ABRACLQ9P1F3 81 aa-0.23□□□□□ -2.45
TRPS1-204ENST00000422939 POLR2KP53803 58 aaKnown RBP-0.25□□□□□ -2.45
TRPS1-204ENST00000422939 TOMM5Q8N4H5 51 aa-0.29□□□□□ -2.46
TRPS1-204ENST00000422939 RPL39P62891 51 aaKnown RBP-0.31□□□□□ -2.46
TRPS1-204ENST00000422939 RPL39LQ96EH5 51 aaKnown RBP-0.33□□□□□ -2.46
TRPS1-204ENST00000422939 TOMM7Q9P0U1 55 aa-0.33□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 47.7 ms