RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 MRPL34Q9BQ48 92 aaKnown RBP3.64□□□□□ -1.83
NPIPB3-201ENST00000419180 H0YAA0 97 aa3.62□□□□□ -1.83
NPIPB3-201ENST00000419180 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
NPIPB3-201ENST00000419180 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
NPIPB3-201ENST00000419180 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
NPIPB3-201ENST00000419180 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
NPIPB3-201ENST00000419180 SPRR2EP22531 72 aa3.53□□□□□ -1.84
NPIPB3-201ENST00000419180 SPRR2BP35325 72 aa3.53□□□□□ -1.84
NPIPB3-201ENST00000419180 SPRR2AP35326 72 aa3.53□□□□□ -1.84
NPIPB3-201ENST00000419180 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
NPIPB3-201ENST00000419180 MT1BP07438 61 aa3.51□□□□□ -1.85
NPIPB3-201ENST00000419180 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
NPIPB3-201ENST00000419180 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
NPIPB3-201ENST00000419180 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
NPIPB3-201ENST00000419180 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
NPIPB3-201ENST00000419180 SPRR2DP22532 72 aa3.42□□□□□ -1.86
NPIPB3-201ENST00000419180 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
NPIPB3-201ENST00000419180 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
NPIPB3-201ENST00000419180 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
NPIPB3-201ENST00000419180 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
NPIPB3-201ENST00000419180 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
NPIPB3-201ENST00000419180 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
NPIPB3-201ENST00000419180 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
NPIPB3-201ENST00000419180 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
NPIPB3-201ENST00000419180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
NPIPB3-201ENST00000419180 MT1XP80297 61 aa3.18□□□□□ -1.9
NPIPB3-201ENST00000419180 S4R3F8 94 aa3.18□□□□□ -1.9
NPIPB3-201ENST00000419180 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
NPIPB3-201ENST00000419180 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
NPIPB3-201ENST00000419180 MT3P25713 68 aa3.09□□□□□ -1.91
NPIPB3-201ENST00000419180 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
NPIPB3-201ENST00000419180 MT4P47944 62 aa3.03□□□□□ -1.92
NPIPB3-201ENST00000419180 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
NPIPB3-201ENST00000419180 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
NPIPB3-201ENST00000419180 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
NPIPB3-201ENST00000419180 A0A0D9SG42 100 aa2.95□□□□□ -1.94
NPIPB3-201ENST00000419180 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
NPIPB3-201ENST00000419180 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
NPIPB3-201ENST00000419180 M0QZ58 72 aa2.88□□□□□ -1.95
NPIPB3-201ENST00000419180 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
NPIPB3-201ENST00000419180 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
NPIPB3-201ENST00000419180 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
NPIPB3-201ENST00000419180 MT1EP04732 61 aa2.85□□□□□ -1.95
NPIPB3-201ENST00000419180 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
NPIPB3-201ENST00000419180 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
NPIPB3-201ENST00000419180 MT1GP13640 62 aa2.77□□□□□ -1.97
NPIPB3-201ENST00000419180 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
NPIPB3-201ENST00000419180 MT1MQ8N339 61 aa2.74□□□□□ -1.97
NPIPB3-201ENST00000419180 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
NPIPB3-201ENST00000419180 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
NPIPB3-201ENST00000419180 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
NPIPB3-201ENST00000419180 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
NPIPB3-201ENST00000419180 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
NPIPB3-201ENST00000419180 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
NPIPB3-201ENST00000419180 MT1LQ93083 61 aa2.64□□□□□ -1.99
NPIPB3-201ENST00000419180 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
NPIPB3-201ENST00000419180 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
NPIPB3-201ENST00000419180 TNP1P09430 55 aa2.57□□□□□ -2
NPIPB3-201ENST00000419180 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
NPIPB3-201ENST00000419180 KRTAP5-8O75690 187 aa2.56□□□□□ -2
NPIPB3-201ENST00000419180 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
NPIPB3-201ENST00000419180 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
NPIPB3-201ENST00000419180 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
NPIPB3-201ENST00000419180 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
NPIPB3-201ENST00000419180 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
NPIPB3-201ENST00000419180 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
NPIPB3-201ENST00000419180 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
NPIPB3-201ENST00000419180 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
NPIPB3-201ENST00000419180 MT1AP04731 61 aa2.24□□□□□ -2.05
NPIPB3-201ENST00000419180 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
NPIPB3-201ENST00000419180 PRM1P04553 51 aa2.01□□□□□ -2.09
NPIPB3-201ENST00000419180 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
NPIPB3-201ENST00000419180 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
NPIPB3-201ENST00000419180 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
NPIPB3-201ENST00000419180 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
NPIPB3-201ENST00000419180 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
NPIPB3-201ENST00000419180 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
NPIPB3-201ENST00000419180 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 269.8 ms