RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-203ENST00000414670 KMT2DO14686 5537 aa2.8□□□□□ -1.96
ITGB1-203ENST00000414670 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
ITGB1-203ENST00000414670 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
ITGB1-203ENST00000414670 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
ITGB1-203ENST00000414670 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
ITGB1-203ENST00000414670 MT1BP07438 61 aa2.67□□□□□ -1.98
ITGB1-203ENST00000414670 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
ITGB1-203ENST00000414670 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
ITGB1-203ENST00000414670 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
ITGB1-203ENST00000414670 TNP1P09430 55 aa2.61□□□□□ -1.99
ITGB1-203ENST00000414670 INE1O15225 51 aa2.6□□□□□ -1.99
ITGB1-203ENST00000414670 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
ITGB1-203ENST00000414670 MDN1Q9NU22 5596 aa2.58□□□□□ -2
ITGB1-203ENST00000414670 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
ITGB1-203ENST00000414670 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
ITGB1-203ENST00000414670 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
ITGB1-203ENST00000414670 MT1XP80297 61 aa2.57□□□□□ -2
ITGB1-203ENST00000414670 KRTAP10-5P60370 271 aa2.56□□□□□ -2
ITGB1-203ENST00000414670 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
ITGB1-203ENST00000414670 KRTAP10-7P60409 375 aaPredicted RBP2.48□□□□□ -2.01
ITGB1-203ENST00000414670 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
ITGB1-203ENST00000414670 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
ITGB1-203ENST00000414670 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
ITGB1-203ENST00000414670 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
ITGB1-203ENST00000414670 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
ITGB1-203ENST00000414670 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
ITGB1-203ENST00000414670 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
ITGB1-203ENST00000414670 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ITGB1-203ENST00000414670 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
ITGB1-203ENST00000414670 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
ITGB1-203ENST00000414670 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
ITGB1-203ENST00000414670 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
ITGB1-203ENST00000414670 MT1EP04732 61 aa2.26□□□□□ -2.05
ITGB1-203ENST00000414670 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
ITGB1-203ENST00000414670 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
ITGB1-203ENST00000414670 MT1LQ93083 61 aa2.21□□□□□ -2.06
ITGB1-203ENST00000414670 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
ITGB1-203ENST00000414670 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
ITGB1-203ENST00000414670 MT1GP13640 62 aa2.17□□□□□ -2.06
ITGB1-203ENST00000414670 LCE1AQ5T7P2 110 aa2.15□□□□□ -2.07
ITGB1-203ENST00000414670 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
ITGB1-203ENST00000414670 SPRR2EP22531 72 aa2.13□□□□□ -2.07
ITGB1-203ENST00000414670 SPRR2BP35325 72 aa2.13□□□□□ -2.07
ITGB1-203ENST00000414670 SPRR2AP35326 72 aa2.13□□□□□ -2.07
ITGB1-203ENST00000414670 MT1MQ8N339 61 aa2.13□□□□□ -2.07
ITGB1-203ENST00000414670 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
ITGB1-203ENST00000414670 SPRR2DP22532 72 aa2.07□□□□□ -2.08
ITGB1-203ENST00000414670 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
ITGB1-203ENST00000414670 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
ITGB1-203ENST00000414670 MT3P25713 68 aa2.04□□□□□ -2.08
ITGB1-203ENST00000414670 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
ITGB1-203ENST00000414670 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-203ENST00000414670 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.1
ITGB1-203ENST00000414670 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
ITGB1-203ENST00000414670 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
ITGB1-203ENST00000414670 MT1AP04731 61 aa1.88□□□□□ -2.11
ITGB1-203ENST00000414670 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
ITGB1-203ENST00000414670 MT4P47944 62 aa1.79□□□□□ -2.12
ITGB1-203ENST00000414670 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
ITGB1-203ENST00000414670 LCE3EQ5T5B0 92 aa1.74□□□□□ -2.13
ITGB1-203ENST00000414670 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
ITGB1-203ENST00000414670 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
ITGB1-203ENST00000414670 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
ITGB1-203ENST00000414670 PRM1P04553 51 aa1.66□□□□□ -2.14
ITGB1-203ENST00000414670 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
ITGB1-203ENST00000414670 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
ITGB1-203ENST00000414670 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
ITGB1-203ENST00000414670 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
ITGB1-203ENST00000414670 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
ITGB1-203ENST00000414670 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
ITGB1-203ENST00000414670 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms