RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HMGN1P05114 100 aa-3.69□□□□□ -3
RNU4-88P-201ENST00000411220 ARPC4P59998 168 aa-3.69□□□□□ -3
RNU4-88P-201ENST00000411220 SNRPFP62306 86 aaKnown RBP-3.69□□□□□ -3
RNU4-88P-201ENST00000411220 CCL7P80098 99 aa-3.7□□□□□ -3
RNU4-88P-201ENST00000411220 TMEM167AQ8TBQ9 72 aa-3.7□□□□□ -3
RNU4-88P-201ENST00000411220 PLNP26678 52 aa-3.71□□□□□ -3
RNU4-88P-201ENST00000411220 DEFB108BQ8NET1 73 aa-3.71□□□□□ -3
RNU4-88P-201ENST00000411220 ABCA6Q8N139 1617 aa-3.72□□□□□ -3
RNU4-88P-201ENST00000411220 EFCAB5A4FU69 1503 aa-3.73□□□□□ -3.01
RNU4-88P-201ENST00000411220 H3BVH4 76 aa-3.73□□□□□ -3.01
RNU4-88P-201ENST00000411220 TCEAL7Q9BRU2 100 aa-3.73□□□□□ -3.01
RNU4-88P-201ENST00000411220 TPM2P07951 284 aa-3.74□□□□□ -3.01
RNU4-88P-201ENST00000411220 TPM1P09493 284 aa-3.74□□□□□ -3.01
RNU4-88P-201ENST00000411220 RPL39P62891 51 aaKnown RBP-3.74□□□□□ -3.01
RNU4-88P-201ENST00000411220 SAMD9LQ8IVG5 1584 aa-3.74□□□□□ -3.01
RNU4-88P-201ENST00000411220 FAM25AB3EWG3 89 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 FAM25CB3EWG5 89 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 FAM25GB3EWG6 89 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 CCDC172P0C7W6 258 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 DDA1Q9BW61 102 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 GID8Q9NWU2 228 aa-3.75□□□□□ -3.01
RNU4-88P-201ENST00000411220 AKAIN1P0CW23 69 aa-3.76□□□□□ -3.01
RNU4-88P-201ENST00000411220 DLEU1O43261 78 aa-3.77□□□□□ -3.01
RNU4-88P-201ENST00000411220 ST20Q9HBF5 79 aa-3.77□□□□□ -3.01
RNU4-88P-201ENST00000411220 IQGAP2Q13576 1575 aa-3.78□□□□□ -3.01
RNU4-88P-201ENST00000411220 CNTLNQ9NXG0 1405 aa-3.78□□□□□ -3.02
RNU4-88P-201ENST00000411220 RPL39LQ96EH5 51 aaKnown RBP-3.79□□□□□ -3.02
RNU4-88P-201ENST00000411220 HOPXQ9BPY8 73 aaPredicted RBP-3.79□□□□□ -3.02
RNU4-88P-201ENST00000411220 PPP3R1P63098 170 aa-3.8□□□□□ -3.02
RNU4-88P-201ENST00000411220 TRIQKQ629K1 86 aa-3.8□□□□□ -3.02
RNU4-88P-201ENST00000411220 LINC01549A6NIU2 74 aa-3.82□□□□□ -3.02
RNU4-88P-201ENST00000411220 DEFB108AA8MXU0 73 aa-3.82□□□□□ -3.02
RNU4-88P-201ENST00000411220 CPS1P31327 1500 aa-3.82□□□□□ -3.02
RNU4-88P-201ENST00000411220 KANTRA0A1W2PQU2 76 aa-3.83□□□□□ -3.02
RNU4-88P-201ENST00000411220 K7EIM0 57 aa-3.83□□□□□ -3.02
RNU4-88P-201ENST00000411220 E5RI56 91 aa-3.84□□□□□ -3.02
RNU4-88P-201ENST00000411220 GNG7O60262 68 aa-3.85□□□□□ -3.03
RNU4-88P-201ENST00000411220 GNG4P50150 75 aa-3.86□□□□□ -3.03
RNU4-88P-201ENST00000411220 GNG13Q9P2W3 67 aa-3.86□□□□□ -3.03
RNU4-88P-201ENST00000411220 CTXN2P0C2S0 81 aa-3.87□□□□□ -3.03
RNU4-88P-201ENST00000411220 HILPDAQ9Y5L2 63 aa-3.87□□□□□ -3.03
RNU4-88P-201ENST00000411220 GTF2H5Q6ZYL4 71 aa-3.9□□□□□ -3.03
RNU4-88P-201ENST00000411220 SMIM15Q7Z3B0 74 aa-3.92□□□□□ -3.04
RNU4-88P-201ENST00000411220 S100A16Q96FQ6 103 aaKnown RBP-3.92□□□□□ -3.04
RNU4-88P-201ENST00000411220 ARHGAP5-AS1Q96IT6 56 aa-3.93□□□□□ -3.04
RNU4-88P-201ENST00000411220 HSBP1L1C9JCN9 74 aa-3.94□□□□□ -3.04
RNU4-88P-201ENST00000411220 PYY3Q5JQD4 70 aa-3.97□□□□□ -3.04
RNU4-88P-201ENST00000411220 FANCD2Q9BXW9 1451 aa-3.98□□□□□ -3.05
RNU4-88P-201ENST00000411220 CORTO00230 105 aa-3.99□□□□□ -3.05
RNU4-88P-201ENST00000411220 TPM3P06753 285 aa-3.99□□□□□ -3.05
RNU4-88P-201ENST00000411220 ATP6V1G2-DDX39BF2Z307 99 aa-4□□□□□ -3.05
RNU4-88P-201ENST00000411220 SMCO4Q9NRQ5 59 aa-4.01□□□□□ -3.05
RNU4-88P-201ENST00000411220 SNRPGP15A8MWD9 76 aa-4.02□□□□□ -3.05
RNU4-88P-201ENST00000411220 CHMP6Q96FZ7 201 aa-4.03□□□□□ -3.05
RNU4-88P-201ENST00000411220 GNG10P50151 68 aa-4.04□□□□□ -3.06
RNU4-88P-201ENST00000411220 C18orf32Q8TCD1 76 aa-4.04□□□□□ -3.06
RNU4-88P-201ENST00000411220 PTMAP06454 111 aaKnown RBP-4.05□□□□□ -3.06
RNU4-88P-201ENST00000411220 ADIRFQ15847 76 aa-4.06□□□□□ -3.06
RNU4-88P-201ENST00000411220 C14orf144Q96I85 54 aa-4.07□□□□□ -3.06
RNU4-88P-201ENST00000411220 M0R143 59 aa-4.09□□□□□ -3.06
RNU4-88P-201ENST00000411220 Q9H521 79 aa-4.09□□□□□ -3.06
RNU4-88P-201ENST00000411220 CMC2Q9NRP2 79 aa-4.09□□□□□ -3.06
RNU4-88P-201ENST00000411220 A0A1B0GV90 55 aa-4.1□□□□□ -3.07
RNU4-88P-201ENST00000411220 GNG14A0A1W2PPG7 69 aa-4.1□□□□□ -3.07
RNU4-88P-201ENST00000411220 RPL39P5Q59GN2 51 aa-4.11□□□□□ -3.07
RNU4-88P-201ENST00000411220 GCC2Q8IWJ2 1684 aa-4.13□□□□□ -3.07
RNU4-88P-201ENST00000411220 GNG8Q9UK08 70 aa-4.14□□□□□ -3.07
RNU4-88P-201ENST00000411220 V9GYS6 101 aa-4.14□□□□□ -3.07
RNU4-88P-201ENST00000411220 S100A13Q99584 98 aa-4.2□□□□□ -3.08
RNU4-88P-201ENST00000411220 SNRPGP62308 76 aaKnown RBP-4.23□□□□□ -3.09
RNU4-88P-201ENST00000411220 SMIM5Q71RC9 77 aa-4.37□□□□□ -3.11
RNU4-88P-201ENST00000411220 EFCAB10A6NFE3 127 aa-4.43□□□□□ -3.12
RNU4-88P-201ENST00000411220 GNG2P59768 71 aa-4.48□□□□□ -3.13
RNU4-88P-201ENST00000411220 LOC105371267A0A1B0GV96 52 aa-4.51□□□□□ -3.13
RNU4-88P-201ENST00000411220 SMIM31A0A1B0GVY4 71 aa-4.68□□□□□ -3.16
RNU4-88P-201ENST00000411220 TOMM5Q8N4H5 51 aa-4.71□□□□□ -3.16
RNU4-88P-201ENST00000411220 PTMSP20962 102 aa-5.01□□□□□ -3.21
Retrieved 77 of 20,778 RNA–protein pairs in 75.9 ms