RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
LINC02408-201ENST00000400306 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
LINC02408-201ENST00000400306 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
LINC02408-201ENST00000400306 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
LINC02408-201ENST00000400306 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
LINC02408-201ENST00000400306 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
LINC02408-201ENST00000400306 A0A0D9SG42 100 aa3.48□□□□□ -1.85
LINC02408-201ENST00000400306 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
LINC02408-201ENST00000400306 M0QZ58 72 aa3.47□□□□□ -1.85
LINC02408-201ENST00000400306 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
LINC02408-201ENST00000400306 R4GN34 69 aa3.46□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
LINC02408-201ENST00000400306 MT1BP07438 61 aa3.42□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
LINC02408-201ENST00000400306 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
LINC02408-201ENST00000400306 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
LINC02408-201ENST00000400306 KMT2DO14686 5537 aa3.33□□□□□ -1.88
LINC02408-201ENST00000400306 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
LINC02408-201ENST00000400306 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
LINC02408-201ENST00000400306 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
LINC02408-201ENST00000400306 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.89
LINC02408-201ENST00000400306 MT1XP80297 61 aa3.26□□□□□ -1.89
LINC02408-201ENST00000400306 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
LINC02408-201ENST00000400306 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
LINC02408-201ENST00000400306 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
LINC02408-201ENST00000400306 SPRR2EP22531 72 aa3.21□□□□□ -1.9
LINC02408-201ENST00000400306 SPRR2BP35325 72 aa3.21□□□□□ -1.9
LINC02408-201ENST00000400306 SPRR2AP35326 72 aa3.21□□□□□ -1.9
LINC02408-201ENST00000400306 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
LINC02408-201ENST00000400306 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
LINC02408-201ENST00000400306 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
LINC02408-201ENST00000400306 INE1O15225 51 aa3.12□□□□□ -1.91
LINC02408-201ENST00000400306 SPRR2DP22532 72 aa3.12□□□□□ -1.91
LINC02408-201ENST00000400306 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
LINC02408-201ENST00000400306 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
LINC02408-201ENST00000400306 TNP1P09430 55 aa3.02□□□□□ -1.93
LINC02408-201ENST00000400306 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
LINC02408-201ENST00000400306 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
LINC02408-201ENST00000400306 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
LINC02408-201ENST00000400306 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
LINC02408-201ENST00000400306 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
LINC02408-201ENST00000400306 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
LINC02408-201ENST00000400306 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
LINC02408-201ENST00000400306 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
LINC02408-201ENST00000400306 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
LINC02408-201ENST00000400306 MT1EP04732 61 aa2.87□□□□□ -1.95
LINC02408-201ENST00000400306 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
LINC02408-201ENST00000400306 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.96
LINC02408-201ENST00000400306 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
LINC02408-201ENST00000400306 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
LINC02408-201ENST00000400306 MT1LQ93083 61 aa2.79□□□□□ -1.96
LINC02408-201ENST00000400306 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
LINC02408-201ENST00000400306 MT4P47944 62 aa2.76□□□□□ -1.97
LINC02408-201ENST00000400306 MT1GP13640 62 aa2.72□□□□□ -1.97
LINC02408-201ENST00000400306 MT1MQ8N339 61 aa2.72□□□□□ -1.97
LINC02408-201ENST00000400306 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
LINC02408-201ENST00000400306 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
LINC02408-201ENST00000400306 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
LINC02408-201ENST00000400306 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
LINC02408-201ENST00000400306 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
LINC02408-201ENST00000400306 MT1AP04731 61 aa2.36□□□□□ -2.03
LINC02408-201ENST00000400306 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
LINC02408-201ENST00000400306 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
LINC02408-201ENST00000400306 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
LINC02408-201ENST00000400306 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
LINC02408-201ENST00000400306 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
LINC02408-201ENST00000400306 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
LINC02408-201ENST00000400306 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
LINC02408-201ENST00000400306 PRM1P04553 51 aa1.95□□□□□ -2.1
LINC02408-201ENST00000400306 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
LINC02408-201ENST00000400306 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
LINC02408-201ENST00000400306 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
LINC02408-201ENST00000400306 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
LINC02408-201ENST00000400306 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 262.8 ms