RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TFF3Q07654 80 aa-2.69□□□□□ -2.84
CMC1-202ENST00000396610 SYCP2Q9BX26 1530 aa-2.69□□□□□ -2.84
CMC1-202ENST00000396610 ABCA6Q8N139 1617 aa-2.7□□□□□ -2.84
CMC1-202ENST00000396610 H0YGX0 51 aa-2.7□□□□□ -2.84
CMC1-202ENST00000396610 ASPMQ8IZT6 3477 aa-2.7□□□□□ -2.84
CMC1-202ENST00000396610 SMIM2Q9BVW6 85 aa-2.74□□□□□ -2.85
CMC1-202ENST00000396610 DUOX2Q9NRD8 1548 aa-2.75□□□□□ -2.85
CMC1-202ENST00000396610 UGGT1Q9NYU2 1555 aa-2.75□□□□□ -2.85
CMC1-202ENST00000396610 IQGAP3Q86VI3 1631 aa-2.75□□□□□ -2.85
CMC1-202ENST00000396610 DEFB133Q30KQ1 61 aa-2.76□□□□□ -2.85
CMC1-202ENST00000396610 VCANP13611 3396 aa-2.76□□□□□ -2.85
CMC1-202ENST00000396610 CENPFP49454 3210 aa-2.77□□□□□ -2.85
CMC1-202ENST00000396610 AGLP35573 1532 aa-2.81□□□□□ -2.86
CMC1-202ENST00000396610 KRTAP19-2Q3LHN2 52 aa-2.81□□□□□ -2.86
CMC1-202ENST00000396610 DDX60Q8IY21 1712 aaKnown RBP-2.82□□□□□ -2.86
CMC1-202ENST00000396610 RHPN1-AS1Q9BWJ2 59 aa-2.82□□□□□ -2.86
CMC1-202ENST00000396610 BRCA2P51587 3418 aa-2.82□□□□□ -2.86
CMC1-202ENST00000396610 CDH23Q9H251 3354 aa-2.82□□□□□ -2.86
CMC1-202ENST00000396610 UGGT2Q9NYU1 1516 aa-2.83□□□□□ -2.86
CMC1-202ENST00000396610 PLNP26678 52 aa-2.84□□□□□ -2.86
CMC1-202ENST00000396610 CLTCL1P53675 1640 aa-2.84□□□□□ -2.86
CMC1-202ENST00000396610 CD52P31358 61 aa-2.85□□□□□ -2.87
CMC1-202ENST00000396610 HTN1P15515 57 aa-2.86□□□□□ -2.87
CMC1-202ENST00000396610 A0A096LNI7 61 aa-2.87□□□□□ -2.87
CMC1-202ENST00000396610 SMCO4Q9NRQ5 59 aa-2.87□□□□□ -2.87
CMC1-202ENST00000396610 CPS1P31327 1500 aa-2.88□□□□□ -2.87
CMC1-202ENST00000396610 PDCD5O14737 125 aa-2.88□□□□□ -2.87
CMC1-202ENST00000396610 TOMM7Q9P0U1 55 aa-2.9□□□□□ -2.87
CMC1-202ENST00000396610 TRPM2O94759 1503 aa-2.9□□□□□ -2.87
CMC1-202ENST00000396610 LINC01590Q5TEZ4 76 aa-2.91□□□□□ -2.88
CMC1-202ENST00000396610 VPS13AQ96RL7 3174 aa-2.92□□□□□ -2.88
CMC1-202ENST00000396610 ABCA5Q8WWZ7 1642 aa-2.93□□□□□ -2.88
CMC1-202ENST00000396610 IQGAP1P46940 1657 aa-2.96□□□□□ -2.88
CMC1-202ENST00000396610 NFAT5O94916 1531 aa-2.98□□□□□ -2.89
CMC1-202ENST00000396610 PRXQ9BXM0 1461 aa-2.99□□□□□ -2.89
CMC1-202ENST00000396610 ABCA10Q8WWZ4 1543 aa-2.99□□□□□ -2.89
CMC1-202ENST00000396610 NDUFA1O15239 70 aa-3□□□□□ -2.89
CMC1-202ENST00000396610 EFCAB5A4FU69 1503 aa-3.01□□□□□ -2.89
CMC1-202ENST00000396610 ADCY10Q96PN6 1610 aa-3.04□□□□□ -2.9
CMC1-202ENST00000396610 A0A087WWC5 75 aa-3.08□□□□□ -2.9
CMC1-202ENST00000396610 DEFB124Q8NES8 71 aa-3.08□□□□□ -2.9
CMC1-202ENST00000396610 SMIM5Q71RC9 77 aa-3.12□□□□□ -2.91
CMC1-202ENST00000396610 ABCC8Q09428 1581 aa-3.14□□□□□ -2.91
CMC1-202ENST00000396610 DUOX1Q9NRD9 1551 aa-3.14□□□□□ -2.91
CMC1-202ENST00000396610 CMC2Q9NRP2 79 aa-3.15□□□□□ -2.91
CMC1-202ENST00000396610 FANCD2Q9BXW9 1451 aa-3.16□□□□□ -2.91
CMC1-202ENST00000396610 UTRNP46939 3433 aa-3.17□□□□□ -2.92
CMC1-202ENST00000396610 LINC01556Q5JQF7 62 aa-3.2□□□□□ -2.92
CMC1-202ENST00000396610 ERICH3Q5RHP9 1530 aa-3.2□□□□□ -2.92
CMC1-202ENST00000396610 RPL39P62891 51 aaKnown RBP-3.22□□□□□ -2.92
CMC1-202ENST00000396610 TOP2AP11388 1531 aaKnown RBP-3.26□□□□□ -2.93
CMC1-202ENST00000396610 SAMD9LQ8IVG5 1584 aa-3.29□□□□□ -2.94
CMC1-202ENST00000396610 DEFB104AQ8WTQ1 72 aa-3.31□□□□□ -2.94
CMC1-202ENST00000396610 RPL39LQ96EH5 51 aaKnown RBP-3.32□□□□□ -2.94
CMC1-202ENST00000396610 ATP7AQ04656 1500 aa-3.37□□□□□ -2.95
CMC1-202ENST00000396610 H3BUX3 64 aa-3.39□□□□□ -2.95
CMC1-202ENST00000396610 MROH2BQ7Z745 1585 aa-3.43□□□□□ -2.96
CMC1-202ENST00000396610 APELAP0DMC3 54 aa-3.51□□□□□ -2.97
CMC1-202ENST00000396610 A0A096LPF7 62 aa-3.55□□□□□ -2.98
CMC1-202ENST00000396610 GOLGB1Q14789 3259 aaKnown RBP-3.57□□□□□ -2.98
CMC1-202ENST00000396610 SNRPGP15A8MWD9 76 aa-3.62□□□□□ -2.99
CMC1-202ENST00000396610 K7EIM0 57 aa-3.64□□□□□ -2.99
CMC1-202ENST00000396610 SMIM31A0A1B0GVY4 71 aa-3.67□□□□□ -3
CMC1-202ENST00000396610 HTN3P15516 51 aa-3.69□□□□□ -3
CMC1-202ENST00000396610 IQGAP2Q13576 1575 aa-3.7□□□□□ -3
CMC1-202ENST00000396610 PRCDQ00LT1 54 aa-3.73□□□□□ -3.01
CMC1-202ENST00000396610 ARHGAP5-AS1Q96IT6 56 aa-3.74□□□□□ -3.01
CMC1-202ENST00000396610 TOMM5Q8N4H5 51 aa-3.75□□□□□ -3.01
CMC1-202ENST00000396610 TMEM167AQ8TBQ9 72 aa-3.77□□□□□ -3.01
CMC1-202ENST00000396610 Q9Y3F1 56 aa-3.98□□□□□ -3.05
CMC1-202ENST00000396610 H3BSH0 61 aa-3.99□□□□□ -3.05
CMC1-202ENST00000396610 SNRPGP62308 76 aaKnown RBP-4.04□□□□□ -3.06
CMC1-202ENST00000396610 RPL39P5Q59GN2 51 aa-4.07□□□□□ -3.06
CMC1-202ENST00000396610 DEFB108AA8MXU0 73 aa-4.1□□□□□ -3.07
CMC1-202ENST00000396610 GCC2Q8IWJ2 1684 aa-4.11□□□□□ -3.07
CMC1-202ENST00000396610 COX14Q96I36 57 aa-4.19□□□□□ -3.08
CMC1-202ENST00000396610 DEFB108BQ8NET1 73 aa-4.35□□□□□ -3.11
CMC1-202ENST00000396610 STATHP02808 62 aa-4.69□□□□□ -3.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms