RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PKD1P98161 4303 aa1.2□□□□□ -2.22
HMGB1P10-201ENST00000395823 DEFB133Q30KQ1 61 aa1.19□□□□□ -2.22
HMGB1P10-201ENST00000395823 LEAP2Q969E1 77 aa1.19□□□□□ -2.22
HMGB1P10-201ENST00000395823 DEFB110Q30KQ9 67 aa1.17□□□□□ -2.22
HMGB1P10-201ENST00000395823 CLPSL2Q6UWE3 100 aa1.17□□□□□ -2.22
HMGB1P10-201ENST00000395823 SPINK6Q6UWN8 80 aa1.17□□□□□ -2.22
HMGB1P10-201ENST00000395823 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
HMGB1P10-201ENST00000395823 TOMM7Q9P0U1 55 aa1.16□□□□□ -2.22
HMGB1P10-201ENST00000395823 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
HMGB1P10-201ENST00000395823 SPINK1P00995 79 aa1.15□□□□□ -2.23
HMGB1P10-201ENST00000395823 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
HMGB1P10-201ENST00000395823 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
HMGB1P10-201ENST00000395823 M0QZ58 72 aa1.13□□□□□ -2.23
HMGB1P10-201ENST00000395823 DEFB104AQ8WTQ1 72 aa1.13□□□□□ -2.23
HMGB1P10-201ENST00000395823 TNXBP22105 4242 aa1.13□□□□□ -2.23
HMGB1P10-201ENST00000395823 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
HMGB1P10-201ENST00000395823 LPAP08519 4548 aa1.11□□□□□ -2.23
HMGB1P10-201ENST00000395823 APELAP0DMC3 54 aa1.11□□□□□ -2.23
HMGB1P10-201ENST00000395823 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
HMGB1P10-201ENST00000395823 M0R2T5 61 aa1.1□□□□□ -2.23
HMGB1P10-201ENST00000395823 SMR3BP02814 79 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P10-201ENST00000395823 DEFB1P60022 68 aa1.09□□□□□ -2.23
HMGB1P10-201ENST00000395823 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
HMGB1P10-201ENST00000395823 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
HMGB1P10-201ENST00000395823 DEFB108BQ8NET1 73 aa1.08□□□□□ -2.24
HMGB1P10-201ENST00000395823 RHPN1-AS1Q9BWJ2 59 aa1.07□□□□□ -2.24
HMGB1P10-201ENST00000395823 HMCN1Q96RW7 5635 aa1.06□□□□□ -2.24
HMGB1P10-201ENST00000395823 C9orf92A6NGG3 77 aa1.05□□□□□ -2.24
HMGB1P10-201ENST00000395823 TNP1P09430 55 aa1.02□□□□□ -2.25
HMGB1P10-201ENST00000395823 DNAH8Q96JB1 4490 aa1.01□□□□□ -2.25
HMGB1P10-201ENST00000395823 H3BUX3 64 aa1.01□□□□□ -2.25
HMGB1P10-201ENST00000395823 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
HMGB1P10-201ENST00000395823 MUC17Q685J3 4493 aa1□□□□□ -2.25
HMGB1P10-201ENST00000395823 MUC5ACP98088 5654 aa1□□□□□ -2.25
HMGB1P10-201ENST00000395823 MT1HL1P0DM35 61 aa0.98□□□□□ -2.25
HMGB1P10-201ENST00000395823 HTN1P15515 57 aa0.98□□□□□ -2.25
HMGB1P10-201ENST00000395823 KRTAP19-6Q3LI70 58 aa0.97□□□□□ -2.25
HMGB1P10-201ENST00000395823 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
HMGB1P10-201ENST00000395823 SPRR2EP22531 72 aa0.96□□□□□ -2.26
HMGB1P10-201ENST00000395823 SPRR2BP35325 72 aa0.96□□□□□ -2.26
HMGB1P10-201ENST00000395823 SPRR2AP35326 72 aa0.96□□□□□ -2.26
HMGB1P10-201ENST00000395823 H3BNG1 76 aa0.95□□□□□ -2.26
HMGB1P10-201ENST00000395823 DEFB136Q30KP8 78 aa0.95□□□□□ -2.26
HMGB1P10-201ENST00000395823 SPRR2DP22532 72 aa0.94□□□□□ -2.26
HMGB1P10-201ENST00000395823 A0A096LPF7 62 aa0.93□□□□□ -2.26
HMGB1P10-201ENST00000395823 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
HMGB1P10-201ENST00000395823 MT1HP80294 61 aa0.9□□□□□ -2.27
HMGB1P10-201ENST00000395823 PRM1P04553 51 aa0.89□□□□□ -2.27
HMGB1P10-201ENST00000395823 A0A096LNI7 61 aa0.88□□□□□ -2.27
HMGB1P10-201ENST00000395823 MT4P47944 62 aa0.87□□□□□ -2.27
HMGB1P10-201ENST00000395823 FLGP20930 4061 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P10-201ENST00000395823 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
HMGB1P10-201ENST00000395823 DEFB4AO15263 64 aa0.82□□□□□ -2.28
HMGB1P10-201ENST00000395823 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
HMGB1P10-201ENST00000395823 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
HMGB1P10-201ENST00000395823 HTN3P15516 51 aa0.8□□□□□ -2.28
HMGB1P10-201ENST00000395823 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
HMGB1P10-201ENST00000395823 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
HMGB1P10-201ENST00000395823 KRTAP19-2Q3LHN2 52 aa0.74□□□□□ -2.29
HMGB1P10-201ENST00000395823 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
HMGB1P10-201ENST00000395823 MT1AP04731 61 aa0.72□□□□□ -2.29
HMGB1P10-201ENST00000395823 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
HMGB1P10-201ENST00000395823 MT2AP02795 61 aa0.7□□□□□ -2.3
HMGB1P10-201ENST00000395823 MT1FP04733 61 aa0.69□□□□□ -2.3
HMGB1P10-201ENST00000395823 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
HMGB1P10-201ENST00000395823 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
HMGB1P10-201ENST00000395823 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
HMGB1P10-201ENST00000395823 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
HMGB1P10-201ENST00000395823 KRTAP19-8Q3LI54 63 aa0.56□□□□□ -2.32
HMGB1P10-201ENST00000395823 MT1XP80297 61 aa0.55□□□□□ -2.32
HMGB1P10-201ENST00000395823 MT1EP04732 61 aa0.53□□□□□ -2.32
HMGB1P10-201ENST00000395823 MT1BP07438 61 aa0.52□□□□□ -2.33
HMGB1P10-201ENST00000395823 MT1LQ93083 61 aa0.51□□□□□ -2.33
HMGB1P10-201ENST00000395823 KRTAP19-7Q3SYF9 63 aa0.5□□□□□ -2.33
HMGB1P10-201ENST00000395823 MT1GP13640 62 aa0.42□□□□□ -2.34
HMGB1P10-201ENST00000395823 MT1MQ8N339 61 aa0.41□□□□□ -2.34
HMGB1P10-201ENST00000395823 KRTAP6-1Q3LI64 71 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 106.7 ms