RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
CCDC110-202ENST00000393540 KRTAP12-2P59991 146 aa1.74□□□□□ -2.13
CCDC110-202ENST00000393540 MT1HP80294 61 aa1.74□□□□□ -2.13
CCDC110-202ENST00000393540 A0A0D9SG42 100 aa1.73□□□□□ -2.13
CCDC110-202ENST00000393540 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
CCDC110-202ENST00000393540 KRTAP10-7P60409 375 aaPredicted RBP1.72□□□□□ -2.13
CCDC110-202ENST00000393540 M0QZ58 72 aa1.71□□□□□ -2.14
CCDC110-202ENST00000393540 M0R2T5 61 aa1.71□□□□□ -2.14
CCDC110-202ENST00000393540 MT2AP02795 61 aa1.68□□□□□ -2.14
CCDC110-202ENST00000393540 MT1FP04733 61 aa1.68□□□□□ -2.14
CCDC110-202ENST00000393540 KRTAP4-3Q9BYR4 195 aa1.68□□□□□ -2.14
CCDC110-202ENST00000393540 ROMO1P60602 79 aa1.68□□□□□ -2.14
CCDC110-202ENST00000393540 R4GN34 69 aa1.68□□□□□ -2.14
CCDC110-202ENST00000393540 SPINT4Q6UDR6 99 aa1.67□□□□□ -2.14
CCDC110-202ENST00000393540 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
CCDC110-202ENST00000393540 C10orf95Q9H7T3 257 aa1.65□□□□□ -2.15
CCDC110-202ENST00000393540 CRIPTQ9P021 101 aa1.65□□□□□ -2.15
CCDC110-202ENST00000393540 K7ERS5 55 aa1.64□□□□□ -2.15
CCDC110-202ENST00000393540 KRTAP25-1Q3LHN0 102 aa1.63□□□□□ -2.15
CCDC110-202ENST00000393540 KRTAP10-10P60014 251 aa1.62□□□□□ -2.15
CCDC110-202ENST00000393540 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
CCDC110-202ENST00000393540 MT1BP07438 61 aa1.61□□□□□ -2.15
CCDC110-202ENST00000393540 KRTAP19-8Q3LI54 63 aa1.61□□□□□ -2.15
CCDC110-202ENST00000393540 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
CCDC110-202ENST00000393540 KRTAP10-5P60370 271 aa1.57□□□□□ -2.16
CCDC110-202ENST00000393540 MT1XP80297 61 aa1.57□□□□□ -2.16
CCDC110-202ENST00000393540 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
CCDC110-202ENST00000393540 CAMK2N1Q7Z7J9 78 aa1.56□□□□□ -2.16
CCDC110-202ENST00000393540 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
CCDC110-202ENST00000393540 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
CCDC110-202ENST00000393540 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
CCDC110-202ENST00000393540 TNP1P09430 55 aa1.51□□□□□ -2.17
CCDC110-202ENST00000393540 LCE1EQ5T753 118 aa1.5□□□□□ -2.17
CCDC110-202ENST00000393540 LCE3AQ5TA76 89 aa1.5□□□□□ -2.17
CCDC110-202ENST00000393540 KRTAP23-1A1A580 65 aa1.5□□□□□ -2.17
CCDC110-202ENST00000393540 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
CCDC110-202ENST00000393540 KRTAP15-1Q3LI76 137 aa1.5□□□□□ -2.17
CCDC110-202ENST00000393540 PP632Q6XCG6 107 aa1.48□□□□□ -2.17
CCDC110-202ENST00000393540 KRTAP10-12P60413 245 aa1.47□□□□□ -2.17
CCDC110-202ENST00000393540 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
CCDC110-202ENST00000393540 PRO2289Q9P1D8 64 aa1.44□□□□□ -2.18
CCDC110-202ENST00000393540 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
CCDC110-202ENST00000393540 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
CCDC110-202ENST00000393540 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CCDC110-202ENST00000393540 KRTAP19-7Q3SYF9 63 aa1.41□□□□□ -2.18
CCDC110-202ENST00000393540 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
CCDC110-202ENST00000393540 SPRR2EP22531 72 aa1.38□□□□□ -2.19
CCDC110-202ENST00000393540 SPRR2BP35325 72 aa1.38□□□□□ -2.19
CCDC110-202ENST00000393540 SPRR2AP35326 72 aa1.38□□□□□ -2.19
CCDC110-202ENST00000393540 LCE1AQ5T7P2 110 aa1.38□□□□□ -2.19
CCDC110-202ENST00000393540 KRTAP9-6A8MVA2 160 aa1.38□□□□□ -2.19
CCDC110-202ENST00000393540 MT1EP04732 61 aa1.36□□□□□ -2.19
CCDC110-202ENST00000393540 LCE3CQ5T5A8 94 aa1.34□□□□□ -2.19
CCDC110-202ENST00000393540 MT1LQ93083 61 aa1.34□□□□□ -2.19
CCDC110-202ENST00000393540 SPRR2DP22532 72 aa1.33□□□□□ -2.2
CCDC110-202ENST00000393540 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
CCDC110-202ENST00000393540 MT1MQ8N339 61 aa1.27□□□□□ -2.21
CCDC110-202ENST00000393540 MT1GP13640 62 aa1.25□□□□□ -2.21
CCDC110-202ENST00000393540 INE1O15225 51 aa1.24□□□□□ -2.21
CCDC110-202ENST00000393540 MT4P47944 62 aa1.24□□□□□ -2.21
CCDC110-202ENST00000393540 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
CCDC110-202ENST00000393540 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
CCDC110-202ENST00000393540 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
CCDC110-202ENST00000393540 MT1AP04731 61 aa1.12□□□□□ -2.23
CCDC110-202ENST00000393540 LCE1FQ5T754 118 aa1.11□□□□□ -2.23
CCDC110-202ENST00000393540 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
CCDC110-202ENST00000393540 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
CCDC110-202ENST00000393540 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
CCDC110-202ENST00000393540 KRTAP12-4P60329 112 aa1.02□□□□□ -2.25
CCDC110-202ENST00000393540 LCE3DQ9BYE3 92 aa0.99□□□□□ -2.25
CCDC110-202ENST00000393540 MT3P25713 68 aa0.99□□□□□ -2.25
CCDC110-202ENST00000393540 LCE3EQ5T5B0 92 aa0.97□□□□□ -2.25
CCDC110-202ENST00000393540 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
CCDC110-202ENST00000393540 LCE1CQ5T751 118 aa0.89□□□□□ -2.27
CCDC110-202ENST00000393540 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
CCDC110-202ENST00000393540 PRM1P04553 51 aa0.89□□□□□ -2.27
CCDC110-202ENST00000393540 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 125.1 ms