RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
CTSS-201ENST00000368985 KRTAP10-5P60370 271 aa2.09□□□□□ -2.07
CTSS-201ENST00000368985 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.07
CTSS-201ENST00000368985 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.08
CTSS-201ENST00000368985 NEBP20929 6669 aa2.08□□□□□ -2.08
CTSS-201ENST00000368985 MT1BP07438 61 aa2.06□□□□□ -2.08
CTSS-201ENST00000368985 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
CTSS-201ENST00000368985 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
CTSS-201ENST00000368985 KMT2DO14686 5537 aa2□□□□□ -2.09
CTSS-201ENST00000368985 INE1O15225 51 aa1.98□□□□□ -2.09
CTSS-201ENST00000368985 LCE1AQ5T7P2 110 aa1.98□□□□□ -2.09
CTSS-201ENST00000368985 KRTAP2-3P0C7H8 128 aa1.98□□□□□ -2.09
CTSS-201ENST00000368985 KRTAP2-4Q9BYR9 128 aa1.98□□□□□ -2.09
CTSS-201ENST00000368985 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
CTSS-201ENST00000368985 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
CTSS-201ENST00000368985 TNP1P09430 55 aa1.95□□□□□ -2.1
CTSS-201ENST00000368985 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
CTSS-201ENST00000368985 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CTSS-201ENST00000368985 MT1XP80297 61 aa1.91□□□□□ -2.1
CTSS-201ENST00000368985 PP632Q6XCG6 107 aa1.91□□□□□ -2.1
CTSS-201ENST00000368985 KRTAP2-2Q9BYT5 123 aa1.9□□□□□ -2.11
CTSS-201ENST00000368985 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.11
CTSS-201ENST00000368985 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CTSS-201ENST00000368985 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
CTSS-201ENST00000368985 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
CTSS-201ENST00000368985 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.12
CTSS-201ENST00000368985 SPRR2EP22531 72 aa1.83□□□□□ -2.12
CTSS-201ENST00000368985 SPRR2BP35325 72 aa1.83□□□□□ -2.12
CTSS-201ENST00000368985 SPRR2AP35326 72 aa1.83□□□□□ -2.12
CTSS-201ENST00000368985 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
CTSS-201ENST00000368985 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
CTSS-201ENST00000368985 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
CTSS-201ENST00000368985 SPRR2DP22532 72 aa1.79□□□□□ -2.12
CTSS-201ENST00000368985 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
CTSS-201ENST00000368985 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
CTSS-201ENST00000368985 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
CTSS-201ENST00000368985 MT3P25713 68 aa1.73□□□□□ -2.13
CTSS-201ENST00000368985 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
CTSS-201ENST00000368985 MT1EP04732 61 aa1.72□□□□□ -2.13
CTSS-201ENST00000368985 KRTAP5-4Q6L8H1 288 aa1.72□□□□□ -2.13
CTSS-201ENST00000368985 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
CTSS-201ENST00000368985 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
CTSS-201ENST00000368985 LCE3CQ5T5A8 94 aa1.72□□□□□ -2.13
CTSS-201ENST00000368985 MT1GP13640 62 aa1.72□□□□□ -2.13
CTSS-201ENST00000368985 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
CTSS-201ENST00000368985 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
CTSS-201ENST00000368985 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
CTSS-201ENST00000368985 MT1MQ8N339 61 aa1.63□□□□□ -2.15
CTSS-201ENST00000368985 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
CTSS-201ENST00000368985 MT1LQ93083 61 aa1.63□□□□□ -2.15
CTSS-201ENST00000368985 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
CTSS-201ENST00000368985 MT4P47944 62 aa1.61□□□□□ -2.15
CTSS-201ENST00000368985 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
CTSS-201ENST00000368985 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
CTSS-201ENST00000368985 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
CTSS-201ENST00000368985 KRTAP9-6A8MVA2 160 aa1.54□□□□□ -2.16
CTSS-201ENST00000368985 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
CTSS-201ENST00000368985 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
CTSS-201ENST00000368985 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
CTSS-201ENST00000368985 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
CTSS-201ENST00000368985 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
CTSS-201ENST00000368985 MT1AP04731 61 aa1.45□□□□□ -2.18
CTSS-201ENST00000368985 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CTSS-201ENST00000368985 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
CTSS-201ENST00000368985 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
CTSS-201ENST00000368985 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
CTSS-201ENST00000368985 KRTAP5-8O75690 187 aa1.4□□□□□ -2.19
CTSS-201ENST00000368985 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
CTSS-201ENST00000368985 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
CTSS-201ENST00000368985 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CTSS-201ENST00000368985 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
CTSS-201ENST00000368985 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
CTSS-201ENST00000368985 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CTSS-201ENST00000368985 PRM1P04553 51 aa1.12□□□□□ -2.23
CTSS-201ENST00000368985 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
CTSS-201ENST00000368985 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
CTSS-201ENST00000368985 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 57.2 ms