RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 SPRR2AP35326 72 aa3.71□□□□□ -1.82
SCNM1-201ENST00000368902 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
SCNM1-201ENST00000368902 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
SCNM1-201ENST00000368902 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
SCNM1-201ENST00000368902 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
SCNM1-201ENST00000368902 MT1XP80297 61 aa3.67□□□□□ -1.82
SCNM1-201ENST00000368902 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
SCNM1-201ENST00000368902 KRTAP23-1A1A580 65 aa3.64□□□□□ -1.83
SCNM1-201ENST00000368902 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
SCNM1-201ENST00000368902 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
SCNM1-201ENST00000368902 SPRR2DP22532 72 aa3.6□□□□□ -1.83
SCNM1-201ENST00000368902 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
SCNM1-201ENST00000368902 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
SCNM1-201ENST00000368902 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
SCNM1-201ENST00000368902 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
SCNM1-201ENST00000368902 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
SCNM1-201ENST00000368902 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
SCNM1-201ENST00000368902 A0A0D9SG42 100 aa3.51□□□□□ -1.85
SCNM1-201ENST00000368902 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SCNM1-201ENST00000368902 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
SCNM1-201ENST00000368902 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
SCNM1-201ENST00000368902 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
SCNM1-201ENST00000368902 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
SCNM1-201ENST00000368902 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
SCNM1-201ENST00000368902 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SCNM1-201ENST00000368902 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
SCNM1-201ENST00000368902 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
SCNM1-201ENST00000368902 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
SCNM1-201ENST00000368902 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
SCNM1-201ENST00000368902 MT1EP04732 61 aa3.25□□□□□ -1.89
SCNM1-201ENST00000368902 TNP1P09430 55 aa3.24□□□□□ -1.89
SCNM1-201ENST00000368902 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
SCNM1-201ENST00000368902 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
SCNM1-201ENST00000368902 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
SCNM1-201ENST00000368902 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
SCNM1-201ENST00000368902 MT1GP13640 62 aa3.16□□□□□ -1.9
SCNM1-201ENST00000368902 MT4P47944 62 aa3.16□□□□□ -1.9
SCNM1-201ENST00000368902 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SCNM1-201ENST00000368902 MT1LQ93083 61 aa3.12□□□□□ -1.91
SCNM1-201ENST00000368902 INE1O15225 51 aa3.11□□□□□ -1.91
SCNM1-201ENST00000368902 MT1MQ8N339 61 aa3.09□□□□□ -1.91
SCNM1-201ENST00000368902 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SCNM1-201ENST00000368902 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SCNM1-201ENST00000368902 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SCNM1-201ENST00000368902 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
SCNM1-201ENST00000368902 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
SCNM1-201ENST00000368902 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
SCNM1-201ENST00000368902 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SCNM1-201ENST00000368902 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
SCNM1-201ENST00000368902 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SCNM1-201ENST00000368902 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SCNM1-201ENST00000368902 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SCNM1-201ENST00000368902 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
SCNM1-201ENST00000368902 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
SCNM1-201ENST00000368902 MT3P25713 68 aa2.76□□□□□ -1.97
SCNM1-201ENST00000368902 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
SCNM1-201ENST00000368902 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
SCNM1-201ENST00000368902 MT1AP04731 61 aa2.66□□□□□ -1.98
SCNM1-201ENST00000368902 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SCNM1-201ENST00000368902 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SCNM1-201ENST00000368902 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
SCNM1-201ENST00000368902 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SCNM1-201ENST00000368902 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
SCNM1-201ENST00000368902 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SCNM1-201ENST00000368902 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SCNM1-201ENST00000368902 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
SCNM1-201ENST00000368902 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
SCNM1-201ENST00000368902 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
SCNM1-201ENST00000368902 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
SCNM1-201ENST00000368902 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
SCNM1-201ENST00000368902 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
SCNM1-201ENST00000368902 PRM1P04553 51 aa1.95□□□□□ -2.1
SCNM1-201ENST00000368902 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
SCNM1-201ENST00000368902 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SCNM1-201ENST00000368902 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
SCNM1-201ENST00000368902 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SCNM1-201ENST00000368902 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 77.7 ms